You should not be using the inflated surface (rather the midthickness surface would be more appropriate). It is possible that the command does not work correctly without a little pre-smoothing but Tim will need to comment on that.
Peace, Matt. On 10/17/14, 5:29 AM, "K. Wagstyl" <[email protected]> wrote: >Hi HCP-users list, > >I'm having trouble using the metric gradient command. > >Using workbench: >wb_command -metric-gradient 1.L.inflated.164k_fs_LR.surf.gii >1.L.thickness.164k_fs_LR.shape.gii >1.L.thicknessgradient.164k_fs_LR.shape.gii > >Or Caret: >caret_command -metric-gradient 1.L.inflated.164k_fs_LR.coord.gii NULL >1.L.thickness.164k_fs_LR.shape.gii 1 1.L.gradient.164k_fs_LR.shape.gii >NULL 1 true 3 > >Either the commands don't run or the magnitude is returned as zeros. >Could I check what the input files ought to be? > > >Thanks, >Konrad >_______________________________________________ >HCP-Users mailing list >[email protected] >http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
