Sorry, dtifit was autocorrected to drift
—
Joseph M. Orr, Ph.D.
Post-Doctoral Fellow
Institute of Cognitive Science
University of Colorado Boulder


From: Joseph Orr <[email protected]<mailto:[email protected]>>
Date: Tuesday, November 11, 2014 at 11:45 AM
To: "[email protected]<mailto:[email protected]>" 
<[email protected]<mailto:[email protected]>>
Subject: [HCP-Users] speckled FA with dtifit on b1000 shell

Per suggestions posted a few weeks back I am running drift only on the b=1000 
shell.

I used fslsplit to extract the volumes from data, then merged the files with 
b=1000. I also extracted the bvals and bvecs for the corresponding volumes. 
Running drift, my resulting FA map is very speckled (see attached), though the 
corpus callosum is somewhat visible. This is the case with or without using 
grad_dev. Is this expected or am I doing something wrong?

Thanks,
Joe

—
Joseph M. Orr, Ph.D.
Post-Doctoral Fellow
Institute of Cognitive Science
University of Colorado Boulder


_______________________________________________
HCP-Users mailing list
[email protected]<mailto:[email protected]>
http://lists.humanconnectome.org/mailman/listinfo/hcp-users

_______________________________________________
HCP-Users mailing list
[email protected]
http://lists.humanconnectome.org/mailman/listinfo/hcp-users

Reply via email to