Hello Burke, 1) PALS-B12 atlas datasets and spec files are generally in Caret5 format, whereas Workbench spec files are indeed very different.
2) wb_import -spec-file allows conversion of caret5 spec files and (most) data files to workbench format. 3) Some of the PALS-B12 atlas parcellations (label files) already exist on the 164k and 32k Conte69 meshes and are accessible (along with other good stuff) in the Connectome Workbench v 1.0 dataset (http://www.humanconnectome.org/software/get-connectome-workbench.html) 4) Conversion from PALS-B12 (74k mesh) to Conte69 (164k and/or 32k mesh) can be handled as described in http://brainvis.wustl.edu/wiki/index.php/Caret:Atlases:Conte69_Atlas I hope this helps. David On Nov 20, 2014, at 9:45 PM, BURKE ALLEN MCSWAIN <[email protected]> wrote: > Dr. Van Essen, > > > My name is Burke and I am currently looking to use the PALS-B12 atlas in > Workbench (WB). It has become very obvious the .spec files for the atlas will > not load in WB. Comparing the conte69 (for WB) and PALS .spec files in a code > editor, the files appear to use different mark-up elements. > > Does a compatible PALS atlas exist for Workbench? > Is it possible to perform some procedural process to PALS files to use them > in Workbench? > If so, can you guide me to the needed information or connect me with someone > that can? > > > Very grateful for the service you provide with hosted files and as a source > for information. > > > > Best Wishes, > > Burke McSwain > > _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
