On 09 Dec 2014 at 12:29, "Book, Gregory" <[email protected]> wrote: > > We’ve run into a weird problem when using the GenericfMRIVolume batch > script to process more than 2 tasks at a time. When we setup any more > than 2 tasks (we’ve tried 3 and 4 tasks), the first 2 run correctly > and without error, but any after that crash in the TopUp section with > the following error (the failed tasks all get to the same point): ...
On 09 Dec 2014 at 15:11, "Xu, Junqian" <[email protected]> wrote: > > After a second thought, maybe convert the list to array specifically > for the comparison purpose so the rest of the pipeline script don't > need to be modified to use array indexing. > ... Gordon and Gregory, Comments indicating that the Tasklist and PhaseEncodinglist should have the same number of space-delimited elements, and a test to verify that this is true before starting the main processing loop have been added to the GenericfMRIVolumeProcessingPipelineBatch.sh script that is in the example scripts directory. This change will be included in the next released version of the HCP Pipeline Scripts. Gregory, thank you for pointing out the issue. Gordon, thank you for the suggested changes. Tim -- Timothy B. Brown Business & Technology Application Analyst III Pipeline Developer (Human Connectome Project) tbbrown(at)wustl.edu ________________________________________ The material in this message is private and may contain Protected Healthcare Information (PHI). If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
