Re: [HCP-Users] Duplicate names in "${HCPPIPEDIR_Config}/FreeSurferAllLut.txt" ?

[Glasser, Matthew]

That is just a warning and doesn’t have any practical impact that I am aware of. Peace, Matt. From: Alex Cohen <alexco...@gmail.com> Reply-To: "alexco...@gmail.com" <alexco...@gmail.com> Date: Thursday, February 12, 2015 at 11:27 PM To: Matt Glasser <glass...@wusm.wustl.edu> Cc: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: Re: [HCP-Users] Duplicate names in "${HCPPIPEDIR_Config}/FreeSurferAllLut.txt" ? Hi Matt,  I see you still keep similar hours... Interesting... wb_command's current behavior is to do the following... I wonder if the name really should be changed... Level: WARNING Method: static void caret::OperationVolumeLabelImport::useParameters(caret::OperationParameters *, caret::ProgressObject *) File:   /Users/caret/caret7_development/mac64/caret7_source/src/Operations/OperationVolumeLabelImport.cxx Line:   196 Text:   name collision in input name 'CTX-LH-UNKNOWN', changing one to 'CTX-LH-UNKNOWN_1' -Alex ---------------------------------------------------------------- Alexander Li Cohen, M.D., Ph.D. Resident Physician Child and Adolescent Neurology E-mail: cohen.alexan...@mayo.edu (Medical/Science Email) E-mail: alexco...@gmail.com (Lifetime Email) Mayo Clinic 200 First Street SW Rochester, MN 55905 mayoclinic.org ---------------------------------------------------------------- On Thu, Feb 12, 2015 at 11:19 PM, Glasser, Matthew <glass...@wusm.wustl.edu> wrote: Hi Alex, Those were translated directly from FreeSurfer’s master LUT file, so you’ll have to ask them… :) Peace, Matt. From: Alex Cohen <alexco...@gmail.com> Reply-To: "alexco...@gmail.com" <alexco...@gmail.com> Date: Thursday, February 12, 2015 at 11:17 PM To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: [HCP-Users] Duplicate names in "${HCPPIPEDIR_Config}/FreeSurferAllLut.txt" ? Hi all,  so why are there multiple entries with the same name in this file? This adds a bunch of "errors" of name collision when running wb_command -volume-label-import, but are they needed for some reason? -Alex Example: $ more Pipelines-3.4.0/global/config/FreeSurferAllLut.txt | grep -A1 -n UNKNOWN 743:CTX-LH-UNKNOWN 744-1000 25 5 25 255 -- 815:CTX-RH-UNKNOWN 816-2000 25 5 25 255 -- 887:WM-LH-UNKNOWN 888-3000 230 250 230 255 -- 959:WM-RH-UNKNOWN 960-4000 230 250 230 255 -- 1031:CTX-LH-UNKNOWN 1032-1100 0 0 0 255 -- 1213:CTX-RH-UNKNOWN 1214-2100 0 0 0 255 -- 1395:WM-LH-UNKNOWN 1396-3100 0 0 0 255 -- 1559:WM-RH-UNKNOWN 1560-4100 0 0 0 255 -- 1923:CTX_LH_UNKNOWN 1924-11100 0 0 0 255 -- 2075:CTX_RH_UNKNOWN 2076-12100 0 0 0 255 -- 2227:WM_LH_UNKNOWN 2228-13100 0 0 0 255 -- 2379:WM_RH_UNKNOWN 2380-14100 0 0 0 255 ---------------------------------------------------------------- Alexander Li Cohen, M.D., Ph.D. Resident Physician Child and Adolescent Neurology E-mail: cohen.alexan...@mayo.edu (Medical/Science Email) E-mail: alexco...@gmail.com (Lifetime Email) Mayo Clinic 200 First Street SW Rochester, MN 55905 mayoclinic.org ---------------------------------------------------------------- _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users   The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail.   The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users