Re: [HCP-Users] Slice Timing Correction

[Harms, Michael]

HI Arjuna, We don't have much experience here with using SPM.  If SPM has a mode for specifying acquisition time (rather than order), then yes, I would think that you should just be able to use the times specified in that file. Also, since you found the timing file, I assume you've seen this page where we have some comments on STC: https://wiki.humanconnectome.org/display/PublicData/HCP+fMRI+slice-timing+acquisition+parameters cheers, -MH --  Michael Harms, Ph.D. ----------------------------------------------------------- Conte Center for the Neuroscience of Mental Disorders Washington University School of Medicine Department of Psychiatry, Box 8134 660 South Euclid Ave. Tel: 314-747-6173 St. Louis, MO  63110 Email: mha...@wustl.edu From: Arjuna Chatrathi <arjunachatrathi2...@u.northwestern.edu> Date: Thursday, May 7, 2015 9:55 AM To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: [HCP-Users] Slice Timing Correction Hello, When using SPM12 to perform Slice Timing Correction, would I just input the BOLD acquisition times specified here for the Slice Order, or would I need to translate those times into a specified slice order. Thank you, Arjuna Chatrathi _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users   The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users