We are trying to improve our epi volume to T1 co-registration using the "topup" 
option in the AllGenericVolume ProcessingPipeline. We are using the phase 
appropriate topup (SpinEcho)  as the SBref because of its improved contrast. 
While our co-registration has been much improved, the co-registration in the  
HCP examples is better.  Are there and suggestions that could further improve 
the epi- T1 co-registration  (such as how  modify the TopUpConfig (b02b0.cnf) 
parameters ) ?

We are currently using a 3T GE scanner.
Thanks
Juan

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