Hi HCP Users, There appear to be commands within PostFreeSurferPipelineBatch that use multi-threading, because my call to this script was just terminated due to its over-use of resources on our computing cluster. Termination occurred at one of the calls to wb_command -- within CreateRibbon, I believe, probably the first call in that script. None of the wb_command calls contain any obvious multi-threading flags.
Does wb_command use multi-threading by default? If so, how can I turn it off? For what it's worth, here's the output of a call to "top" just before the process terminated: PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 6264 dbliss 20 0 1988m 324m 9988 R 2140.2 0.4 2:33.03 wb_command 29044 dbliss 20 0 563m 123m 17m R 99.8 0.1 21:59.53 python 29072 dbliss 20 0 563m 122m 17m R 99.8 0.1 21:57.55 python Note that wb_command is using 2000+% of the CPU resources. Many thanks, Dan _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
