As part of implementing the HCP Minimal Preprocessing Pipeline I'd like to programmatically convert our MR DICOM data into NIFTI files in the directory structure used in the data releases. I know how to do this from scratch using dcm2nii, but I'm assuming this step is already implemented in the HCP IntraDB. Is something like this available or should I roll my own tool that creates the directory structure, converts DICOM to NIFTI, and properly names the resulting files? — Joseph Naegele [C] FMRIF/NIMH/NIH [email protected] 301-496-8101 B10-1D80
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