Hello,
I've been trying to run bedpostx on a single subject's HCP preprocessed
diffusion data (I haven't made any changes from the initial download) on
our cluster. I've run it a number of different ways, and always seem to get
the same error:
/software/fsl/5.0.7/fsl/bin/bedpostx_preproc.sh: line 77: 97699
Killed
${FSLDIR}/bin/fslslice ${subjdir}/data
Seems to be encountering a problem with the fslslice line inside
bedpostx_preproc.
For reference, I'm using the latest version of FSL. I'm entering this
command:
bedpostx subject#/T1w/Diffusion -n 3 -model 2 -g -rician
I've also tested some variations, like without grad_dev/g, etc, always
getting the same error message. Any help?
Thanks,
Sarah Heilbronner
University of Rochester
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