This works great! Thank you!
From: [email protected]
To: [email protected]; [email protected]
Subject: Re: [HCP-Users] A question about saving custom parcellation label map 
in a CIFTI *.dlabel.nii file
Date: Sun, 8 May 2016 19:13:07 +0000






Save the matrix data as dscalar and then make the label table as an 
appropriately formatted text file and combine them with wb_command 
-cifti-label-import.



Peace,



Matt.





From: <[email protected]> on behalf of Aaron C 
<[email protected]>

Date: Sunday, May 8, 2016 at 2:07 PM

To: "[email protected]" <[email protected]>

Subject: [HCP-Users] A question about saving custom parcellation label map in a 
CIFTI *.dlabel.nii file








Dear HCP experts,



I have a question about saving my custom parcellation label map in a CIFTI 
*.dlabel.nii file. I can now save the labels in a *.dscalar.nii file by using 
the CIFTI header of an existing *.dscalar.nii file, but I cannot do the same 
for saving my labels in *.dlabel.nii
 file directly by using the CIFTI header of an existing *.dlabel.nii file,  
because I need to use my own label table for defining label color scheme 
different from the one used in the CIFTI header of the existing *.dlabel.nii 
file.



Would you please advise how can I create a custom *.dlabel.nii file with my own 
ROI names, key values, and corresponding RGB color values from a vector of 
labels for each vertex (32k mesh)?



Many thanks!



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