FSL has an atlas of thalamic subdivisions and FreeSurfer has atlases of 
cerebellar and striatal subdivisions.

Peace,

Matt.

From: 
<[email protected]<mailto:[email protected]>>
 on behalf of Wei Wen <[email protected]<mailto:[email protected]>>
Date: Wednesday, June 29, 2016 at 6:58 PM
To: "[email protected]<mailto:[email protected]>" 
<[email protected]<mailto:[email protected]>>
Subject: [HCP-Users] subfields of subcortical structures

Hi guys,

Do any of you know any software packages or templates that can be used to 
divide a volume of thalamus or any other subcortical structures into its 
subfields, such as the current FreeSurfer does with hippocampus?

Thanks and regards,

Wei

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