You don't need to modify the pipelines to handle 1mm data. Generally upsampling does not create highres information.
Peace, Matt. ________________________________ From: [email protected] <[email protected]> on behalf of Jean-François Cabana <[email protected]> Sent: Saturday, July 23, 2016 7:23:53 AM To: [email protected] Subject: [HCP-Users] Structural data 1mm vs 0.7mm Dear HCP community, Our structural data (T1w and T2w) is acquired at 1 mm isotropic. I modified the FreeSurferPipeline.sh script so that the downsampling step is bypassed and the original image is fed directly to FS. My question is, I wonder if performing upsampling to 0.7 mm and using this upsampled data as input in the 'hires' steps could be useful to fine tune the segmentation. Has anyone tried that before? Thanks, JF _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
