Dear sir,

I have made changes to the directory where my subjects are, i have
mentioned the SubjectId and in that there are T1w and T2w images, I have
just referenced to the paths.

Thanks
Vasudev

On 20 August 2016 at 16:25, Glasser, Matthew <[email protected]> wrote:

> You do have to make changes to the settings so that they are appropriate
> for your study.
>
> Peace,
>
> Matt.
>
> From: Dev vasu <[email protected]>
> Date: Saturday, August 20, 2016 at 9:23 AM
>
> To: Matt Glasser <[email protected]>
> Cc: "<[email protected]>" <[email protected]>
> Subject: Re: Images appear to be distorted and cut after Preprocessing
>
> Dear Sir,
>
> I have just altered the path to subject directory and changed the Subject
> ID, apart from that i have not changed  much in the code written in
> Examples directory.
>
>
> Thanks
> Vasudev
>
> On 20 August 2016 at 16:17, Glasser, Matthew <[email protected]> wrote:
>
>> That would suggest something isn’t set up right in the calls to
>> PreFreeSurfer, so you should post them.
>>
>> Peace,
>>
>> Matt.
>>
>> From: Dev vasu <[email protected]>
>> Date: Saturday, August 20, 2016 at 9:16 AM
>> To: Matt Glasser <[email protected]>
>> Cc: "<[email protected]>" <[email protected]>
>> Subject: Re: Images appear to be distorted and cut after Preprocessing
>>
>> Dear Sir,
>>
>> Its happening to every subject .
>>
>> Thanks
>> Vasudev
>>
>> On 20 August 2016 at 00:35, Glasser, Matthew <[email protected]> wrote:
>>
>>> It is only necessary to post to hcp-users.
>>>
>>> Is this happening with every subject or only a few subjects?
>>>
>>> Matt.
>>>
>>> From: <[email protected]> on behalf of Dev vasu <
>>> [email protected]>
>>> Date: Friday, August 19, 2016 at 11:19 AM
>>> To: "<[email protected]>" <[email protected]>, "
>>> [email protected]" <hcp-users-owner@humanconnecto
>>> me.org>
>>> Subject: Images appear to be distorted and cut after Preprocessing
>>>
>>>
>>> Dear Sir / madam,
>>>
>>> After running Prefreesurfer pipeline on 50 Subjects, the T1w and T2w
>>> images appear cut and very distorted , I am attaching the results for your
>>> verification.
>>>
>>> Please review it and let me know what is the problem .
>>>
>>> Also ,i would like to inform you that my mails are bouncing back, kindly
>>> let me know the issue with my mailing list subscription
>>>
>>>
>>>
>>> Thanks
>>> Vasudev
>>>
>>>
>>> ------------------------------
>>>
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>>> in error, please immediately notify the sender via telephone or return mail.
>>>
>>
>>
>> ------------------------------
>>
>> The materials in this message are private and may contain Protected
>> Healthcare Information or other information of a sensitive nature. If you
>> are not the intended recipient, be advised that any unauthorized use,
>> disclosure, copying or the taking of any action in reliance on the contents
>> of this information is strictly prohibited. If you have received this email
>> in error, please immediately notify the sender via telephone or return mail.
>>
>
>
> ------------------------------
>
> The materials in this message are private and may contain Protected
> Healthcare Information or other information of a sensitive nature. If you
> are not the intended recipient, be advised that any unauthorized use,
> disclosure, copying or the taking of any action in reliance on the contents
> of this information is strictly prohibited. If you have received this email
> in error, please immediately notify the sender via telephone or return mail.
>

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