[] Means it is optional. You don’t need it for surface resampling. You would not use -surface-cut-resample, as that is for flattened surfaces with cut edges.
Peace, Matt. From: Cai Yue <[email protected]<mailto:[email protected]>> Date: Tuesday, August 23, 2016 at 8:56 AM To: Matt Glasser <[email protected]<mailto:[email protected]>> Subject: Re: Re: [HCP-Users] Downsample The CIFTI File Hi Matt, Thanks so much for your reply, it is really helpful. I look over the -surface-resample, it still needs the [-area-surfs] options, and needs the <new-area> file which I don't have. There is also a surface-cut-resample command, it doesn't have this option. For my 10k sphere.surf.gii, are there any differences with the -surface-resample and -surface-cut-resmaple command? I don't know what the flatmaps mean here? Thanks Yue Cai -- Yue Cai, Ph.D Candidate Center of MRI Research Department of Biomedical Engineering College of Engineering Peking University Email: [email protected]<mailto:[email protected]> -----原始邮件----- 发件人:"Glasser, Matthew" <[email protected]<mailto:[email protected]>> 发送时间:2016-08-23 20:22:44 (星期二) 收件人: "Cai Yue" <[email protected]<mailto:[email protected]>>, "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> 抄送: 主题: Re: [HCP-Users] Downsample The CIFTI File You can use wb_command -surface-resample Peace, Matt. From: <[email protected]<mailto:[email protected]>> on behalf of Cai Yue <[email protected]<mailto:[email protected]>> Date: Tuesday, August 23, 2016 at 5:04 AM To: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Subject: [HCP-Users] Downsample The CIFTI File Dear experts, I am trying to downsample the 32k dtseires data using the -cifti-resample, and I followed the methods described in the https://www.mail-archive.com/[email protected]&q=subject:"Re%5C%3A+%5C%5BHCP%5C-Users%5C%5D+wb_command"&o=newest&f=1. However, in the step of using the wb_command -metric-resample, there is a argument in the -area-surfs option, <new-area> - a relevant anatomical surface with <new-sphere> mesh. I got the new-sphere using the -surface-create-sphere (like 10k), however, I don't know how to get the anatomical surface of this 10k sphere (like middlethickness.surf.gii, inflated or very-inflated.surf.gii). Or is there other easier ways to do downsampling? Thanks, Yue Cai -- Yue Cai, Ph.D Candidate Center of MRI Research Department of Biomedical Engineering College of Engineering Peking University Email: [email protected]<mailto:[email protected]> _______________________________________________ HCP-Users mailing list [email protected]<mailto:[email protected]> http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
