That is the FreeSurfer wmparc parcellation and so specific questions about it are probably best asked on the FreeSurfer mailing list. I believe there are publicly available thalamus parcellations of greater detail (e.g. In FSL). I don't know about brainstem...
Peace, Matt. From: <[email protected]<mailto:[email protected]>> on behalf of Dev vasu <[email protected]<mailto:[email protected]>> Date: Thursday, August 25, 2016 at 11:24 AM To: "<[email protected]<mailto:[email protected]>>" <[email protected]<mailto:[email protected]>> Subject: [HCP-Users] 7T data parcellation of Brain Stem and Thalamus Dear Sir , In MNINonLinear / ROIs folder of 7T Preprocessed HCP data , I see the data is not parcellated for Brain stem region and Thalamus region, could you please let me know how i could perform parcellation for these two specific regions of interest ( i.e. Brain stem and Thalamus ). I am annexing the figure for your reference. Thanks Vasudev _______________________________________________ HCP-Users mailing list [email protected]<mailto:[email protected]> http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
