Hi Matt,
It's not compiled matlab.
Best,
Nailin
2016-10-17 13:53 GMT-04:00 Glasser, Matthew <glass...@wustl.edu>:
> Is this compiled matlab or not compiled?
>
> Peace,
>
> Matt.
>
> From: <hcp-users-boun...@humanconnectome.org> on behalf of nailin yao <
> ynai...@gmail.com>
> Date: Monday, October 17, 2016 at 11:13 AM
> To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org>
> Subject: [HCP-Users] hcp_fix bug
>
> Hi ,
>
> I received the bug report when running hcp_fix for the last step:
>
> running FIX
>
> FIX Feature extraction for Melodic output directory:
> rfMRI_REST1_LR_nonlin_norm_hp2000.ica
>
> create edge masks
>
> run FAST
>
> registration of standard space masks
>
> extract features
>
> FIX Classifying components in Melodic directory:
> rfMRI_REST1_LR_nonlin_norm_hp2000.ica using training file:
> /home/fas/glahn/ny87/Pipelines/fix1.06/training_files/HCP_hp2000.RData
> and threshold 10
>
> FIX Applying cleanup using cleanup file: rfMRI_REST1_LR_nonlin_norm_
> hp2000.ica/fix4melview_HCP_hp2000_thr10.txt and motion cleanup set to 1
>
> sh: line 1: 24221 Bus error (core dumped)
> /gpfs/apps/hpc/Apps/Matlab/R2015b/bin/matlab -nojvm -nodisplay -nodesktop
> -nosplash -r "addpath('/home/fas/glahn/ny87/Pipelines/fix1.06');
> addpath('/gpfs/apps/hpc/Apps/FSL/5.0.6/fsl/etc/matlab');
> fix_3_clean('.fix',0,1,2000)" >> .fix.log 2>&1
>
> Does anyone know what's the problem? Thank you very much!
>
> Best,
> Nailin
>
> --
> Nailin Yao, PhD
>
> Postdoctoral Associate
> Department of Psychiatry, Yale University
>
> _______________________________________________
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> HCP-Users@humanconnectome.org
> http://lists.humanconnectome.org/mailman/listinfo/hcp-users
>
>
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--
Nailin Yao, PhD
Postdoctoral Associate
Department of Psychiatry, Yale University
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