Dear HCP team, I am trying to calculate resting-state functional connectivity for subject 100307 using a seed in the right cerebral cortex that I have defined using a ROI metric file. I have tried the following -cifti-correlation code:
/Applications/workbench/bin_macosx64/wb_command -cifti-correlation /Users/xavierguell/Desktop/MRIFILES/HCPDATA/100307REST/MNINonLinear/Results/rfMRI_REST1_LR/rfMRI_REST1_LR_Atlas_MSMAll_hp2000_clean.dtseries.nii /Users/xavierguell/Desktop/MRIFILES/HCPDATA/100307REST/UCTconn1003072BKseed.dconn.nii -roi-override -right-roi /Users/xavierguell/Desktop/MRIFILES/HCPDATA/HCP_S900_GroupAvg_v1/UCTconn1003072BKROI.func.gii The output file (UCTconn1003072BKseed.dconn.nii) is generated and I can open the file in workbench view. However, the file in workbench view does not show color in any brain area. Also, workbench view crashes very frequently after loading the UCTconn1003072BKseed.dconn.nii file. I would be grateful if you could tell me whether there is something wrong in the code I wrote. Thank you very much, Xavier. Xavier Guell Paradis, M.D. Visiting Scientist Massachusetts Institute of Technology McGovern Institute for Brain Research Office: 46-4033A Phone: (617) 324-4355 Email: xavie...@mit.edu _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
