Hi all, Thank you all for providing the HCP data and the great support!
I would like to use the anatomical T1w and T2w data for manual segmentations and am looking for files that are aligned intra individually but not yet nonlinearly registered to MNI space (rigid is fine). Which files would those be in the HCP dataset, these ones?: 'hcp-openaccess/HCP_900/subject-id/T1w/subject-id/mri/T1w_hires.nii.gz’ 'hcp-openaccess/HCP_900/subject-id/T1w/subject-id/mri/T2w_hires.nii.gz’ Reading the Glasser Neuroimage paper 2013* I assume the above mentioned files are - aligned to each other (coregistered within subject and replaced) - distortions are removed - bias field corrected - and registered rigidly to MNI space (using FSL?) Is that correct? Thank you very much! Best, Siobhan *'1) The subject's undistorted native volume space (rigidly “aligned” to the axes of MNI space), which is where volumes and areas of structures should be measured and where tractography should be performed, as this space is the best approximation of the subject's physical brain.' The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
