Hi all,
I am running tractography on single subject bedpostX preprocessed data to
generate structural connectivity matrices of the brain.
I refered to https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FDT/UserGuide for running
the command.
It says "When using surfaces, the user must set the surface coordinate
convention and provide a surface reference volume." and " Use the browse button
to locate a reference image (e.g., subject1.bedpostX/struct.nii.gz if seed
space is structral space).".
However, I am not able to find a surface reference image in the single subject
bedpostX preprocessed data downloaded from connctomeDB.
Could you explain briefly what a surface reference file is and where would I
find one ?
Thanks a lot !
Regards,
Govinda
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