Hi Tim,
What version of the HCP Pipeline Scripts are you using?
That error message, error while loading shared libraries:
libmwlaunchermain, is typical when the compiled MATLAB executable cannot
find the MCR.
As of the last official release (v3.21.0), several of the scripts still
have hard coded paths to where they expect to find the MCR when using
compiled MATLAB. As Matt points out, I'm in the process of updating the
code so that it uses an environment variable to tell it where to look
for the MCR. In the meantime, you can look for the places in the
PostFix.sh script where the script variable matlab_compiler_runtime is
set and change it to the appropriate path to the directory in which the
R2013a MCR is installed on your system.
Hopefully, that will resolve this issue for you.
Tim
On 04/25/2017 10:08 AM, Glasser, Matthew wrote:
We are in the process of updating the codebase that uses matlab to
hopefully make it easier for folks to use compiled matlab. Until that
is completed, I would recommend using interpreted matlab if you can.
Peace,
Matt.
From: <hcp-users-boun...@humanconnectome.org
<mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Timothy
Hendrickson <hendr...@umn.edu <mailto:hendr...@umn.edu>>
Date: Tuesday, April 25, 2017 at 10:03 AM
To: "hcp-users@humanconnectome.org
<mailto:hcp-users@humanconnectome.org>" <HCP-Users@humanconnectome.org
<mailto:HCP-Users@humanconnectome.org>>
Subject: [HCP-Users] Shared Library Error
Hello,
I am attempting to run the PostFix processing stream. I downloaded the
Matlab2013a MCR version as required to run the stream.
I ran into problems once the PostFix stream attempted to call shared
libraries through the LSB executable prepareICAs.
This is the error I received: error while loading shared libraries:
libmwlaunchermain.
so: cannot open shared object file: No such file or directory
-Tim
Timothy Hendrickson
Department of Psychiatry
University of Minnesota
Bioinformatics and Computational Biology M.S. Candidate
Office: 612-624-6441
Mobile: 507-259-3434 (texts okay)
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