The data and the Pipeline scripts are all included in the 2015 HCP Course, and
the subject ID is 100307.
Besides, I have already running three structural pipelines and two functional
pipelines.
Best,
Bai Haohao
------------------ Original ------------------
From: "Glasser, Matthew";<glass...@wustl.edu>;
Date: Thu, Apr 27, 2017 09:08 PM
To: "--"<744652...@qq.com>; "hcp-users"<hcp-users@humanconnectome.org>;
Subject: Re: [SPAM] Re: [HCP-Users] [TaskfMRILevel2]feat_model error
Are you using HCP data or your own task fMRI data?
Peace,
Matt.
From: -- <744652...@qq.com>
Date: Thursday, April 27, 2017 at 3:56 AM
To: Matt Glasser <glass...@wustl.edu>, hcp-users
<hcp-users@humanconnectome.org>
Subject: [SPAM] Re: [HCP-Users] [TaskfMRILevel2]feat_model error
Hello,
I modify the TaskfMRIAnalysisBatch.sh to change StudyFolder, Subjlist and
EnvironmentScript to my own file path.
Then I write a bash file to call copy_evs_into_results.sh and
generate_level1_fsf.sh to generate the files.
Followed Day4_Practical7_Task_fMRI tutorial, I install level2.fsf file.
After that, bash TaskfMRIAnalysisBatch.sh --runlocal
Best,
Bai Haohao
------------------ Original ------------------
From: "Glasser, Matthew";<glass...@wustl.edu>;
Date: Wed, Apr 26, 2017 11:43 PM
To: "--"<744652...@qq.com>;
"hcp-users@humanconnectome.org"<HCP-Users@humanconnectome.org>;
Subject: Re: [HCP-Users] [TaskfMRILevel2]feat_model error
How did you call the task analysis pipeline?
Peace,
Matt.
From: <hcp-users-boun...@humanconnectome.org> on behalf of --
<744652...@qq.com>
Date: Wednesday, April 26, 2017 at 10:35 AM
To: "hcp-users@humanconnectome.org" <HCP-Users@humanconnectome.org>
Subject: [HCP-Users] [TaskfMRILevel2]feat_model error
Hello HCP experts,
I get a fatal error during running Examples/Scripts/TaskfMRIAnalysisBatch.sh,
the error info(also see attached file):
terminate called after throwing an instance of 'NEWMAT::ProgramException'
/home/baihaohao/Workingdir/Pipelines-3.4.0/TaskfMRIAnalysis/scripts/TaskfMRILevel2.sh:
line 56: 79213 Aborted (core dumped) feat_model
${LevelTwoFEATDir}/design
and line56 of TaskfMRILevel2.sh is the red line here:
#Make design files
log_Msg "Make design files"
DIR=`pwd`
cd ${LevelTwoFEATDir}
feat_model ${LevelTwoFEATDir}/design
cd $DIR
I have done steps based on HCP Course Materials Day4_Practical7_Task_fMRI
tutorial, already install level1 and level2.
How can I fix it? Any suggestion would be helpful.
Thanks in advance,
Bai Haohao
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