In that case, I believe what you need is -cifti-separate -- Michael Harms, Ph.D. ----------------------------------------------------------- Conte Center for the Neuroscience of Mental Disorders Washington University School of Medicine Department of Psychiatry, Box 8134 660 South Euclid Ave. Tel: 314-747-6173 St. Louis, MO 63110 Email: mha...@wustl.edu
From: Xavier Guell Paradis <xavie...@mit.edu<mailto:xavie...@mit.edu>> Date: Wednesday, July 5, 2017 at 11:07 AM To: Michael Harms <mha...@wustl.edu<mailto:mha...@wustl.edu>>, "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" <hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: RE: [HCP-Users] Convert a .dscalar.nii to multiple nifti files? Thank you very much for the reply. The .dscalar.nii file that I am interesting in converting to multiple nifti files contains only cerebellar data, which is not surface information. Would there be any way of converting that to multiple nifti files? Thank you very much, Xavier. ________________________________ From: Harms, Michael [mha...@wustl.edu<mailto:mha...@wustl.edu>] Sent: Wednesday, July 05, 2017 12:02 PM To: Xavier Guell Paradis; hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org> Subject: Re: [HCP-Users] Convert a .dscalar.nii to multiple nifti files? Hi, You can’t represent the surface information in a .dscalar.nii via a nifti file. The -cifti-convert -to-nifti command exists for converting a CIFTI to a “fake”-NIFTI file for use in external tools/analyses that can be conducted on a per-grayordinate basis (i.e., without any regard to spatial information). cheers, -MH -- Michael Harms, Ph.D. ----------------------------------------------------------- Conte Center for the Neuroscience of Mental Disorders Washington University School of Medicine Department of Psychiatry, Box 8134 660 South Euclid Ave. Tel: 314-747-6173 St. Louis, MO 63110 Email: mha...@wustl.edu<mailto:mha...@wustl.edu> From: <hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Xavier Guell Paradis <xavie...@mit.edu<mailto:xavie...@mit.edu>> Date: Wednesday, July 5, 2017 at 10:55 AM To: "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" <hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: [HCP-Users] Convert a .dscalar.nii to multiple nifti files? Dear HCP experts, Is it possible to convert a .dscalar.nii which contains 4 different maps to 4 different nifti files (one for each map)? I have tried -cifti-convert -to-nifti but the output was a very strange nifti file. Thank you very much, Xavier. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org> http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
