All of the registration and distortion correction has already been done. All of the T1w images should be in the same mm space, but you may wish to use the file with 1.25 in the name for 3T diffusion and 1.05 in the name for 7T diffusion if you want to use a tool like FSLView that requires the image matrix to be the same.
Peace, Matt. From: <hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Shruti Narasimham <naras...@tcd.ie<mailto:naras...@tcd.ie>> Date: Monday, August 21, 2017 at 9:10 AM To: "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" <hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: [HCP-Users] Which T1 file for 7T Diffusion data? Dear all, I am looking for each subject's T1w structural image corresponding to its 7T processed diffusion data. I am using the data.nii file in the /subject/T1w/Diffusion_7T/ directory. I was wondering which T1 file to use with this data (for subject motion & EC/EPI distortion corrections, as well as, drawing seeds on this T1w file). I can find multiple T1w files in different folders - T1w_acpc_dc.nii, T1w_acpc_dc_restore.nii, T1w_hires.nii (subject/T1w/subject/mri/ folder), etc. I couldn't find an explanation for these in the pdf documents, hence looking for any help and information on this. Thank you. Regards, Shruti _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org> http://lists.humanconnectome.org/mailman/listinfo/hcp-users _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
