There should be a dtseries file produced by fMRISurface in the
${StudyFolder}/${Subject}/MNINonLinear/Results/${fMRIName} folder. Note that
this data will not have had any temporal noise clean up. At a minimum for
HCP-Style data we recommend running ICA+FIX.
Peace,
Matt.
From: Joey Contreras
<[email protected]<mailto:[email protected]>>
Date: Wednesday, October 25, 2017 at 10:55 AM
To: Matt Glasser <[email protected]<mailto:[email protected]>>
Cc: Joey Contreras
<[email protected]<mailto:[email protected]>>,
"[email protected]<mailto:[email protected]>"
<[email protected]<mailto:[email protected]>>
Subject: Re: [HCP-Users] Where to find dconn file after running both fMRIvolume
and fMRIsurface
I ran fMRIvolume and fMRIsurface on the resting state data.
Joey Contreras
On Oct 24, 2017, at 4:55 PM, Glasser, Matthew
<[email protected]<mailto:[email protected]>> wrote:
What pipelines did you run on this data?
Peace,
Matt.
From:
<[email protected]<mailto:[email protected]>>
on behalf of Joey Contreras
<[email protected]<mailto:[email protected]>>
Date: Tuesday, October 24, 2017 at 5:45 PM
To: "[email protected]<mailto:[email protected]>"
<[email protected]<mailto:[email protected]>>
Subject: [HCP-Users] Where to find dconn file after running both fMRIvolume and
fMRIsurface
Hello
I have acquired resting state AP, PA data and have ran it through functional
HCP pipeline. I am looking to load and analyze in connectome workbench but
cannot find the .dconn or deserves.nii files. Would I have had to run another
script to generate these files? Specifically I had hoped to acquire the native
connectivity matrices for my subjects
Joey Contreras
Joey Annette Contreras, PhD
Postdoctoral Scholar - Research Associate
Laboratory of Neuro Imaging (LONI)
USC Stevens Neuroimaging and Informatics Institute
Keck School of Medicine, USC
Email: [email protected]<mailto:[email protected]>
2025 Zonal Ave
Los Angeles, California 90033
Joey Annette Contreras, PhD
Postdoctoral Scholar - Research Associate
Laboratory of Neuro Imaging (LONI)
USC Stevens Neuroimaging and Informatics Institute
Keck School of Medicine, USC
Email: [email protected]<mailto:[email protected]>
2025 Zonal Ave
Los Angeles, California 90033
_______________________________________________
HCP-Users mailing list
[email protected]<mailto:[email protected]>
http://lists.humanconnectome.org/mailman/listinfo/hcp-users<https://urldefense.proofpoint.com/v2/url?u=http-3A__lists.humanconnectome.org_mailman_listinfo_hcp-2Dusers&d=DwMFAg&c=clK7kQUTWtAVEOVIgvi0NU5BOUHhpN0H8p7CSfnc_gI&r=CK-Qy4dfyhx66CjIRvNMQwR9ZvLsAWvy3-qVezflvyQ&m=OdPBakFB8XLilE0CGWO6OTFZkUNLsKNCqQEnu1gpabc&s=hjtHdZaVg_ije7ESYXvhqhH789aQoYtA7HkblLG3xPI&e=>
_______________________________________________
HCP-Users mailing list
[email protected]
http://lists.humanconnectome.org/mailman/listinfo/hcp-users
