Dear Ola, I am not exactly sure what you mean with ‘projecting your results’, but you can use an averaged Template to display your results. If you mean something else, please reformulate your question.
Best wishes, Jan-Mathijs > On 16 Nov 2017, at 20:03, Ola Choukair <ola.chouk...@gmail.com > <mailto:ola.chouk...@gmail.com>> wrote: > > Thank you so much! It actually made my day :) > Just to confirm though, could I also then project my results with the > coordinates of an averaged Template of the meg anatomy data across subjects? > > > Ola Choukair > > > De : hcp-users-requ...@humanconnectome.org > <mailto:hcp-users-requ...@humanconnectome.org> > Envoyé le :15 novembre 2017 13:03 > À : hcp-users@humanconnectome.org <mailto:hcp-users@humanconnectome.org> > Objet :HCP-Users Digest, Vol 60, Issue 16 > > Send HCP-Users mailing list submissions to > hcp-users@humanconnectome.org > <mailto:hcp-users@humanconnectome.org> > > To subscribe or unsubscribe via the World Wide Web, visit > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > <http://lists.humanconnectome.org/mailman/listinfo/hcp-users> > or, via email, send a message with subject or body 'help' to > hcp-users-requ...@humanconnectome.org > <mailto:hcp-users-requ...@humanconnectome.org> > > You can reach the person managing the list at > hcp-users-ow...@humanconnectome.org > <mailto:hcp-users-ow...@humanconnectome.org> > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of HCP-Users digest..." > > > Today's Topics: > > 1. Re: source MEG icablpenv projection (Jan Mathijs Schoffelen) > 2. map names | wb_command (Claude Bajada) > 3. Re: map names | wb_command (Dierker, Donna) > 4. HCP Development and HCP Aging Task fMRI Scripts Released > (Elam, Jennifer) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Tue, 14 Nov 2017 19:22:03 +0100 > From: Jan Mathijs Schoffelen <jm.schoffe...@gmail.com > <mailto:jm.schoffe...@gmail.com>> > Subject: Re: [HCP-Users] source MEG icablpenv projection > To: hcp-users@humanconnectome.org <mailto:hcp-users@humanconnectome.org> > Message-ID: <5406fac2-65d2-490d-93b8-c3281f089...@gmail.com > <mailto:5406fac2-65d2-490d-93b8-c3281f089...@gmail.com>> > Content-Type: text/plain; charset="us-ascii" > > Dear Ola, > > You can directly average across subjects, no morphing is needed. > Best wishes, > Jan-Mathijs > > > J.M.Schoffelen, MD PhD > Senior Researcher, VIDI-fellow - PI, language in interaction > Telephone: +31-24-3614793 > Physical location: room 00.028 > Donders Centre for Cognitive Neuroimaging, Nijmegen, The Netherlands > > > On 14 Nov 2017, at 18:24, Ola Choukair <ola.chouk...@gmail.com > > <mailto:ola.chouk...@gmail.com>> wrote: > > > > Hi! > > using the source MEG dtseries from the icablpenv pipeline, > > if I want to average data across groups, do I need to compute the morph > > matrix ( transfomation matrix of the xyz-individual suface model for the > > 8004 vertex onto the fsaverage template)or is it already projected? > > > > thank you, > > -- > > Ola > > _______________________________________________ > > HCP-Users mailing list > > HCP-Users@humanconnectome.org <mailto:HCP-Users@humanconnectome.org> > > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > > <http://lists.humanconnectome.org/mailman/listinfo/hcp-users> > > > > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: > http://lists.humanconnectome.org/pipermail/hcp-users/attachments/20171114/b992db24/attachment-0001.html > > <http://lists.humanconnectome.org/pipermail/hcp-users/attachments/20171114/b992db24/attachment-0001.html> > > ------------------------------ > > Message: 2 > Date: Wed, 15 Nov 2017 15:33:48 +0100 > From: Claude Bajada <c.baj...@fz-juelich.de <mailto:c.baj...@fz-juelich.de>> > Subject: [HCP-Users] map names | wb_command > To: "hcp-users@humanconnectome.org <mailto:hcp-users@humanconnectome.org>" > <hcp-users@humanconnectome.org <mailto:hcp-users@humanconnectome.org>> > Message-ID: <bc37c72a-d8a8-3b1e-f1fe-c79d8e3e3...@fz-juelich.de > <mailto:bc37c72a-d8a8-3b1e-f1fe-c79d8e3e3...@fz-juelich.de>> > Content-Type: text/plain; charset="utf-8" > > Dear all, > > What is the wb_command syntax to label map names? > > [cid:part1.24ABD659.153881EE@fz-juelich.de > <cid:part1.24ABD659.153881EE@fz-juelich.de>] > > Regards, > > Claude > > > ------------------------------------------------------------------------------------------------ > ------------------------------------------------------------------------------------------------ > Forschungszentrum Juelich GmbH > 52425 Juelich > Sitz der Gesellschaft: Juelich > Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 > Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher > Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), > Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, > Prof. Dr. Sebastian M. Schmidt > ------------------------------------------------------------------------------------------------ > ------------------------------------------------------------------------------------------------ > > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: > http://lists.humanconnectome.org/pipermail/hcp-users/attachments/20171115/21075e9b/attachment-0001.html > > <http://lists.humanconnectome.org/pipermail/hcp-users/attachments/20171115/21075e9b/attachment-0001.html> > -------------- next part -------------- > A non-text attachment was scrubbed... > Name: opiomognndghijnb.png > Type: image/png > Size: 3422 bytes > Desc: not available > Url : > http://lists.humanconnectome.org/pipermail/hcp-users/attachments/20171115/21075e9b/attachment-0001.png > > <http://lists.humanconnectome.org/pipermail/hcp-users/attachments/20171115/21075e9b/attachment-0001.png> > > ------------------------------ > > Message: 3 > Date: Wed, 15 Nov 2017 15:12:04 +0000 > From: "Dierker, Donna" <do...@wustl.edu <mailto:do...@wustl.edu>> > Subject: Re: [HCP-Users] map names | wb_command > To: Claude Bajada <c.baj...@fz-juelich.de <mailto:c.baj...@fz-juelich.de>> > Cc: "hcp-users@humanconnectome.org <mailto:hcp-users@humanconnectome.org>" > <hcp-users@humanconnectome.org <mailto:hcp-users@humanconnectome.org>> > Message-ID: <aaada040-c758-4e8a-9beb-f31ee1464...@email.wustl.edu > <mailto:aaada040-c758-4e8a-9beb-f31ee1464...@email.wustl.edu>> > Content-Type: text/plain; charset="us-ascii" > > See this page: > > https://www.humanconnectome.org/software/workbench-command/-all-commands-help > <https://www.humanconnectome.org/software/workbench-command/-all-commands-help> > > wb_command -set-map-names > <data-file> - the file to set the map names of > > [-name-file] - use a text file to replace all map names > <file> - text file containing map names, one per line > > [-map] - repeatable - specify a map to set the name of > <index> - the map index to change the name of > <new-name> - the name to set for the map > > Sets the name of one or more maps for metric, shape, label, volume, > cifti > scalar or cifti label files. If the -name-file option is not specified, > the -map option must be specified at least once. The -map option cannot > be used when -name-file is specified. > > > > On Nov 15, 2017, at 8:33 AM, Claude Bajada <c.baj...@fz-juelich.de > > <mailto:c.baj...@fz-juelich.de>> wrote: > > > > Dear all, > > > > What is the wb_command syntax to label map names? > > > > <opiomognndghijnb.png> > > > > Regards, > > > > Claude > > > > > > ------------------------------------------------------------------------------------------------ > > ------------------------------------------------------------------------------------------------ > > Forschungszentrum Juelich GmbH > > 52425 Juelich > > Sitz der Gesellschaft: Juelich > > Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 > > Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher > > Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), > > Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, > > Prof. Dr. Sebastian M. Schmidt > > ------------------------------------------------------------------------------------------------ > > ------------------------------------------------------------------------------------------------ > > > > _______________________________________________ > > HCP-Users mailing list > > HCP-Users@humanconnectome.org <mailto:HCP-Users@humanconnectome.org> > > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > > <http://lists.humanconnectome.org/mailman/listinfo/hcp-users> > > > > > ________________________________ > The materials in this message are private and may contain Protected > Healthcare Information or other information of a sensitive nature. If you are > not the intended recipient, be advised that any unauthorized use, disclosure, > copying or the taking of any action in reliance on the contents of this > information is strictly prohibited. If you have received this email in error, > please immediately notify the sender via telephone or return mail. > > > > ------------------------------ > > Message: 4 > Date: Wed, 15 Nov 2017 17:18:56 +0000 > From: "Elam, Jennifer" <e...@wustl.edu <mailto:e...@wustl.edu>> > Subject: [HCP-Users] HCP Development and HCP Aging Task fMRI Scripts > Released > To: "hcp-users@humanconnectome.org <mailto:hcp-users@humanconnectome.org>" > <hcp-users@humanconnectome.org <mailto:hcp-users@humanconnectome.org>>, > "hcp-annou...@humanconnectome.org > <mailto:hcp-annou...@humanconnectome.org>" <hcp-annou...@humanconnectome.org > <mailto:hcp-annou...@humanconnectome.org>> > Message-ID: > > <dm5pr0201mb3573bc9f5d2ceeb383f45d61cc...@dm5pr0201mb3573.namprd02.prod.outlook.com > > <mailto:dm5pr0201mb3573bc9f5d2ceeb383f45d61cc...@dm5pr0201mb3573.namprd02.prod.outlook.com>> > > Content-Type: text/plain; charset="iso-8859-1" > > <http://www.humanconnectome.org/ <http://www.humanconnectome.org/>> > News from the Human Connectome Project (HCP) > November 15, 2017 > > A new generation of Human Connectome Projects are underway to map brain > connections across the lifespan in healthy individuals, including children > and adolescents (HCP > Development<https://www.humanconnectome.org/study/hcp-lifespan-development > <https://www.humanconnectome.org/study/hcp-lifespan-development>>, ages > 5-21), and in older and elderly adults (HCP > Aging<https://www.humanconnectome.org/study/hcp-lifespan-aging > <https://www.humanconnectome.org/study/hcp-lifespan-aging>>, ages 36-90+). > > HCP Development and HCP Aging have optimized two new sets of three functional > MRI tasks to be performed in the scanner, adapted for use in developing > children and older adults. We are now releasing the Psychopy scripts for > running these tasks. > > > For HCP Development, we are using: "EMOTION," "CARIT," and "GUESSING" tasks. > > For HCP Aging, we are using "EMOTION," "FACENAME," and "VISMOTOR" tasks. > > To learn more about each task or download the tasks for your study use, see: > HCP-Development Task > Protocols<https://www.humanconnectome.org/study/hcp-lifespan-development/project-protocol/task-protocols-hcp-development > > <https://www.humanconnectome.org/study/hcp-lifespan-development/project-protocol/task-protocols-hcp-development>> > or HCP-Aging Task > Protocols<https://www.humanconnectome.org/study/hcp-lifespan-aging/project-protocol/task-protocols-hcp-aging > > <https://www.humanconnectome.org/study/hcp-lifespan-aging/project-protocol/task-protocols-hcp-aging>>. > > > Best, > The Lifespan HCP Development and HCP Aging Consortia > > > Jennifer Elam, Ph.D. > Scientific Outreach, Human Connectome Project > Washington University School of Medicine > Department of Neuroscience, Box 8108 > 660 South Euclid Avenue > St. Louis, MO 63110 > 314-362-9387<tel:314-362-9387 <tel:314-362-9387>> > e...@wustl.edu <mailto:e...@wustl.edu><mailto:e...@wustl.edu > <mailto:e...@wustl.edu>> > www.humanconnectome.org > <http://www.humanconnectome.org/><http://www.humanconnectome.org/ > <http://www.humanconnectome.org/>> > > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: > http://lists.humanconnectome.org/pipermail/hcp-users/attachments/20171115/c83a4f59/attachment-0001.html > > <http://lists.humanconnectome.org/pipermail/hcp-users/attachments/20171115/c83a4f59/attachment-0001.html> > > ------------------------------ > > _______________________________________________ > HCP-Users mailing list > HCP-Users@humanconnectome.org <mailto:HCP-Users@humanconnectome.org> > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > <http://lists.humanconnectome.org/mailman/listinfo/hcp-users> > > > End of HCP-Users Digest, Vol 60, Issue 16 > ***************************************** _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
