What subject are you looking at that has a “T1w_MPR1_reorient_sformMod.nii.gz” file? I’m not seeing that file in our “unprocessed” packages for any of a handful of HCP-Young Adult subjects that I just checked…
The other files are as Matt explained, and are also explained in the release documentation. Cheers, -MH -- Michael Harms, Ph.D. ----------------------------------------------------------- Conte Center for the Neuroscience of Mental Disorders Washington University School of Medicine Department of Psychiatry, Box 8134 660 South Euclid Ave. Tel: 314-747-6173 St. Louis, MO 63110 Email: mha...@wustl.edu From: <hcp-users-boun...@humanconnectome.org> on behalf of "Glasser, Matthew" <glass...@wustl.edu> Date: Thursday, December 7, 2017 at 10:13 AM To: Aaron C <aaroncr...@outlook.com>, "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: Re: [HCP-Users] A question about the unprocessed structural data AFI is data that can be used to compute a B1+ transmit field BIAS_32CH and BIAS_BC are data that can be used to compute a B1- receive field FieldMap_Magnitude and FieldMap_Phase can be used to compute a b0 field The other I don’t remember why we generated, but probably has something to do with removing the obliques from the sform. Peace, Matt. From: <hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Aaron C <aaroncr...@outlook.com<mailto:aaroncr...@outlook.com>> Date: Thursday, December 7, 2017 at 8:01 AM To: "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" <hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: [HCP-Users] A question about the unprocessed structural data Dear HCP experts, I have a question about the files in the unprocessed structural data. Could you please explain what are the following files in the subject folders? Thank you. {Subject_ID}.strc_AFI.nii.gz {Subject_ID}.BIAS_32CH.nii.gz {Subject_ID}.BIAS_BC.nii.gz {Subject_ID}.FieldMap_Magnitude.nii.gz {Subject_ID}.FieldMap_Phase.nii.gz {Subject_ID}.T1w_MPR1_reorient_sformMod.nii.gz _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org> http://lists.humanconnectome.org/mailman/listinfo/hcp-users _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
