I use Matlab to run my analyses. I prefer this to using the pipelines. I located a CIFTI reading function in Matlab authored by Matt. This is very useful. I also located files that appear to be CIFTI-formatted under the “rfMRI_REST_fix” category and was able to apply Matt’a CIFTI reading Matlab routine successfully. Am I on the right track?
Thank you for any help you might be able to offer. HP From: Harms, Michael Sent: Thursday, January 04, 2018 4:12 PM To: HERACLES PANAGIOTIDES Cc: Elam, Jennifer Subject: Re: Hi, I think you’ll be able to get started if you review the Release Manual, and the HCP wiki pages. In the near future, the contents from the 2017 HCP Course will be available, and you can work through the tutorials. (Jenn can comment on the timing of that). Or, consider attending the 2018 HCP Course (dates/location not finalized yet, but we are planning on having one) ☺ Cheers, -MH -- Michael Harms, Ph.D. ----------------------------------------------------------- Conte Center for the Neuroscience of Mental Disorders Washington University School of Medicine Department of Psychiatry, Box 8134 660 South Euclid Ave. Tel: 314-747-6173 St. Louis, MO 63110 Email: [email protected] From: HERACLES PANAGIOTIDES <[email protected]> Date: Thursday, January 4, 2018 at 5:55 PM To: "Harms, Michael" <[email protected]> Subject: <no subject> Hello Mike, Jenn Elam suggested that you would be a good person to contact with questions. I am doing ROI analysis on the rfMRI data. Matt suggested that I use CIFTI files for the analysis. So here are my questions at this time: 1. Are there CIFTI files in the database; if so where are they, and how are they labeled? 2. I use Matlab for my analysis. Can I process those files in Matlab? I will wait for your answers before asking more questions. Best, Heracles -------------------------------------------------------------------------------- The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
