Hi Anders,

Yes, the line will be corrected in next version of the Reference Manual to read:

“In the aggregate file the first column is used for the trigger pulse 
information, the second for respiratory information, and the third column for 
pulse oximeter (i.e., cardiac) information."


Best,

Jenn


Jennifer Elam, Ph.D.
Scientific Outreach, Human Connectome Project
Washington University School of Medicine
Department of Neuroscience, Box 8108
660 South Euclid Avenue
St. Louis, MO 63110
314-362-9387<tel:314-362-9387>
[email protected]<mailto:[email protected]>
www.humanconnectome.org<http://www.humanconnectome.org/>


________________________________
From: Glasser, Matthew
Sent: Tuesday, January 9, 2018 11:29:57 AM
To: Anders Eklund; [email protected]
Cc: Elam, Jennifer
Subject: Re: [HCP-Users] Confusion about physiological data

Here is what I have in my physio preprocessing code:

Columns="1,2,3" #Trigger,Respiratory,Cardiac

Peace,

Matt.

From: 
<[email protected]<mailto:[email protected]>>
 on behalf of Anders Eklund <[email protected]<mailto:[email protected]>>
Date: Tuesday, January 9, 2018 at 3:57 AM
To: "[email protected]<mailto:[email protected]>" 
<[email protected]<mailto:[email protected]>>
Subject: [HCP-Users] Confusion about physiological data

Hello,

I'm trying to use the physiological data for fMRI analysis.

In the reference manual (page 39) it states that

"In the aggregate file the first column is used for the trigger pulse 
information, the second for pulse oximeter (i.e., cardiac) information, and the 
third column for respiratory information."

https://www.humanconnectome.org/storage/app/media/documentation/s1200/HCP_S1200_Release_Reference_Manual.pdf

However, according to this conversation on the mailing list the second column 
is respiration, is the manual or the mailing list correct?

https://www.mail-archive.com/[email protected]/msg01484.html

- Anders

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