Dear HCP experts,
I'm currently working on the MSMall stage of the HCP pipeline (using interpreted Matlab), but have encountered the following error: ERROR: failed to open file '.../MNINonLinear/fsaverage_LR32k/sub-1508.individual_RSNs_d40_MSMSulc.32k_fs_LR.dscalar.nii' file does not exist (I've abbreviated the parent directories with "...", our subject is called 'sub-1508') It seems like that missing file is the output of MSMregression.m, and an input file is also missing here. Specifically, the Matlab script is looking for: inputspatialmaps: .../MNINonLinear/fsaverage_LR32k/sub-1508.atlas_RSNs_d40_MSMSulc.32k_fs_LR.dscalar But in the fsaverage_LR32k directory I only have "sub-1508.atlas_RSNs_d40.32k_fs_LR.dscalar" I believe I've run all the necessary earlier stages of the pipeline (FreeSurfer, GenericSurfaceProcessing in MSMsulc mode, and the ICA Fix steps). Any ideas why this "inputspatialmaps" file would be missing? Is it produced in the MSMall stage, or is it supposed to be there before running MSMall? Thank you, Nick Theis _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
