Hello,
Before running the PostFreeSurfer pipeline on our data, we had some
questions -
1) If our T1 resolution is 0.9 mm, and not 0.7 (like the HCP data), will we
encounter a problem during the process of registration back to the native
space using this pipeline?
2) We would appreciate a clarification regarding the variables that are
needed for this script to run (added bellow). we figure that most of the
paths are found in the 'global' dir, but not sure exactly which.

SurfaceAtlasDIR
GrayordinatesSpaceDIR
GrayordinatesResolutions
HighResMesh
LowResMeshes
SubcorticalGrayLabel
FreeSurferLabels
ReferenceMyelinMaps
CorrectionSigma
RegName
InflateExtraScale

Thanks,
Shachar Gal, Tel Aviv University

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