Yep, using the version in bin_linux64 from the zip fixes things. Thanks
-Mike From: hcp-users-boun...@humanconnectome.org <hcp-users-boun...@humanconnectome.org> On Behalf Of Angstadt, Mike Sent: Wednesday, October 24, 2018 3:07 PM To: 'Timothy Coalson' <tsc...@mst.edu> Cc: HCP Users <HCP-Users@humanconnectome.org> Subject: Re: [HCP-Users] ciftiopen problems Running the neurodebian version on Ubuntu 16.04. I’ll take a look at the zipped distribution to see if that fixes things. -Mike From: Timothy Coalson <tsc...@mst.edu<mailto:tsc...@mst.edu>> Sent: Wednesday, October 24, 2018 2:53 PM To: Angstadt, Mike <mangs...@med.umich.edu<mailto:mangs...@med.umich.edu>> Cc: HCP Users <HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org>> Subject: Re: [HCP-Users] ciftiopen problems CAUTION: This email originated outside the University of Michigan DO NOT click links or open attachments if the sender is unknown to you. That implies that when launched by matlab, it is either not finding QT libraries at all, or finding a version it doesn't work with. Are you using linux? Are you using a zip distribution downloaded from the website (as opposed to neurodebian or the older default version the distribution may have)? If it is a zip distribution, are you telling matlab to call the version in bin_linux64 or similar, rather than the one in exe_linux64? The ones in bin_linux64 are scripts that specifically look at LD_LIBRARY_PATH, clear it if it sees any matlab stuff, and add the libraries we ship in the zip distributions. Tim On Wed, Oct 24, 2018 at 1:38 PM, Angstadt, Mike <mangs...@med.umich.edu<mailto:mangs...@med.umich.edu>> wrote: Hey HCP experts, This might be a long shot as I expect there’s something weird going on on our system, but I'm no longer able to use ciftiopen in matlab to read in cifti images. This used to work just fine, and to my knowledge neither connectome workbench or the ciftiopen script or the gifti toolbox has changed on our system. However, now I'm getting the following error when trying to load a cifti image: /usr/bin/wb_command: symbol lookup error: /usr/bin/wb_command: undefined symbol: _ZNK19QAbstractTableModel7siblingEiiRK11QModelIndex Obviously this is fairly easily narrowed down to the matlab system call in ciftiopen that calls out to wb_command to conver the image to gifti. The problem is that issuing the exact same wb_command directly in a bash terminal works fine, but it always fails with the above error when trying to issue it through a system call from matlab. I'm just hoping someone might have some ideas for resolving this, even though it doesn't seem directly releated to workbench or the ciftiopen script. -- Mike Angstadt Research Area Specialist Lead / PANLab Lab Manager Department of Psychiatry / University of Michigan (734) 936-8229 ********************************************************** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org> http://lists.humanconnectome.org/mailman/listinfo/hcp-users ********************************************************** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org> http://lists.humanconnectome.org/mailman/listinfo/hcp-users ********************************************************** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
