Got it. Thank you so much. Best - Zaixu
On Mon, 10 Dec 2018 at 21:21, Timothy Coalson <tsc...@mst.edu> wrote: > The color and alpha numbers should be integers from 0 to 255. > > Tim > > > On Mon, Dec 10, 2018 at 6:56 PM Zaixu Cui <cuizaixu19891...@gmail.com> > wrote: > >> Hi Tim, >> >> Cool. Thank you so much. It works. I just used the command 'wb_command >> -metric-label-import 120292_lh.func.gii '' 120292_lh.label.gii'. >> >> I set the second parameter as null and the color was created as default. >> Is there an example of the text file of the label-list file. I used the >> file as attachment but failed. Is there any problems with this file? >> >> Thank you so much. >> >> Best wishes >> - >> Zaixu >> >> >> >> On Mon, 10 Dec 2018 at 19:02, Timothy Coalson <tsc...@mst.edu> wrote: >> >>> If you save those vectors of values as .func.gii files (maybe this is >>> how you made the .func.gii files you have?), you can use wb_command >>> -metric-label-import to turn them into .label.gii files: >>> >>> >>> https://www.humanconnectome.org/software/workbench-command/-metric-label-import >>> >>> To get them onto HCP surfaces, see FAQ #9 here: >>> >>> >>> https://wiki.humanconnectome.org/display/PublicData/HCP+Users+FAQ#HCPUsersFAQ-9.HowdoImapdatabetweenFreeSurferandHCP >>> ? >>> >>> Tim >>> >>> >>> On Mon, Dec 10, 2018 at 5:50 PM Zaixu Cui <cuizaixu19891...@gmail.com> >>> wrote: >>> >>>> Hi, developers, >>>> >>>> Thank you so much for developing such a fantastic software. I am trying >>>> to visualize an atlas in FreeSurfer fsaverage5 space, but failed to create >>>> *.label.gii file for my atlas. >>>> >>>> I have successfully converted fsaverage5 template into >>>> *.midthickness.surf.gii and converted my atlas into *.func.gii file. Then, >>>> workbench can display the atlas as a metric map. >>>> >>>> However, I need to display it as an atlas, with each region a different >>>> color. So, I tried to covert the atlas into *.label.gii. My atlas is a >>>> 10242*1 vector for left hemisphere and a 10242*1 vector for right >>>> hemisphere. The values in the atlas range from 1 to 100. I tried a lot, but >>>> failed finally. Is there a manual about how to convert a vector into >>>> *.label.gii file that accepted by workbench? >>>> >>>> Thank you so much. >>>> Best >>>> - >>>> Zaixu Cui, Ph.D. >>>> Postdoc fellow at Department of Psychiatry, Perelman School of Medicine >>>> University of Pennsylvania >>>> E-mail: zaixu...@gmail.com >>>> zaixu....@pennmedicine.upenn.edu >>>> >>>> _______________________________________________ >>>> HCP-Users mailing list >>>> HCP-Users@humanconnectome.org >>>> http://lists.humanconnectome.org/mailman/listinfo/hcp-users >>>> >>> _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
