Dear experts,
I was using
s=my_subject_ID
atlas=HCP_S1200_GroupAvg_v1/Gordon333.32k_fs_LR.dlabel.ni
wb_command -cifti-parcellate
$p/MNINonLinear/fsaverage_LR32k/${s}.MyelinMap_BC.32k_fs_LR.dscalar.nii $atlas
COLUMN ${s}.MyelinMap_BC.pscalar.nii -method MEAN
wb_command -cifti-convert -to-text ${s}.MyelinMap_BC.pscalar.nii
${s}.MyelinMap_BC.txt
to obtain average myelin content from each parcel in Gordon333 atlas.
I would now need to obtain myelin map values from each parcel of FreeSurfer's
wmparc and also global value of "myelin" of all white matter.
How can I achieve that?
Thank you very much in advance,
Antonin Skoch
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