Francesc,

This may be a bit late, but have you looked at the documentation for H5Pset_chunk_cache? The parameters there are the same, but the descriptions are more thorough. Due to the (simplistic) hashing algorithm, rdcc_nelmts should be a prime number and should probably be larger than 256 - the default in HDF5 is 521 (not 512) and I believe that is too small in many cases. There is very little downside the setting a larger hash table.

Thanks,
-Neil


On 12/22/2009 02:14 AM, Francesc Alted wrote:
A Monday 21 December 2009 13:27:36 Francesc Alted escrigué:
Hi,

I'm interested in being able to change the cache settings for chunks in
  HDF5. For this, I plan to call:

{{{
herr_t H5Pset_cache(hid_t plist_id, int mdc_nelmts, size_t rdcc_nelmts,
                     size_t rdcc_nbytes, double rdcc_w0)
}}}

before opening an HDF5 file.

Most of the parameters of the H5Pset_cache call are clear, but I cannot
determine a good default for rdcc_nelemts.  From the manual:

{{{
The number of elements (objects) in the raw data chunk cache is
  rdcc_nelmts. The total size of the raw data chunk cache and the preemption
  policy are rdcc_nbytes and rdcc_w0, respectively.
}}}

I'm choosing 10 by default at this time, but I'd be grateful if anybody can
tell me whether this is a decent value or not (and the rational behind
  this).
Ok.  After considering this for a while, I'll stick with a value of 256 as the
default for rdcc_nelmts.  I hope it would not be too much --although, frankly,
the rdcc_nbytes will force a more lower number generally speaking.

Cheers,


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