Yes, I can see the attributes and data in my HDFView, but many error messages were given in the command line window whenever I click the dataset.
FY On Wed, Jul 21, 2010 at 3:52 PM, Peter Cao <[email protected]> wrote: > Forest, > > Can you read all the attributes and datasets? > > Thanks > --pc > > Forest Yang wrote: >> >> Peter, >> >> Thanks! >> >> Then it seems this is Ubuntu distribution related. Java or HDFView >> deb packaging. >> >> Forest. >> >> >> On Wed, Jul 21, 2010 at 12:41 PM, Peter Cao <[email protected]> wrote: >> >>> >>> The file seems OK. I tested the file on CentOS and Windows with HDFVIew >>> 2.6. >>> I did not see any error message. >>> >>> Thanks >>> --pc >>> >>> >>> Forest Yang wrote: >>> >>>> >>>> Hi >>>> >>>> Thanks for replying. Here is the file and version of my HDFView. >>>> >>>> I am using HDFView from Ubuntu repository. >>>> >>>> Shown in "Help" of HDFView: >>>> >>>> HDF5 1.8.4 >>>> HDF4 4.2.4 >>>> HDFView 2.6 >>>> Java 1.6 >>>> >>>> >>>> On Tue, Jul 20, 2010 at 10:13 AM, Peter Cao <[email protected]> wrote: >>>> >>>> >>>>> >>>>> It seems that HDFView failed to open some attributes. If your sample >>>>> file >>>>> is not large, I'd like to take a look the file. Thanks. --pc >>>>> >>>>> Forest Yang wrote: >>>>> >>>>> >>>>>> >>>>>> Hi, >>>>>> >>>>>> I generated a hdf5 file with C/C++ using 1.8.4 on Ubuntu 10.04. The >>>>>> file shows without any problem with h5dump, but HDFview gives a lot of >>>>>> errors. >>>>>> Is it normal or just I did not create a proper hdf5 file ? >>>>>> >>>>>> >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Adeprec.c line 214 in H5Aopen_name(): can't >>>>>> open attribute >>>>>> major: Attribute >>>>>> minor: Can't open object >>>>>> #001: ../../../src/H5A.c line 865 in H5A_open_by_name(): unable to >>>>>> load attribute info from object header >>>>>> major: Attribute >>>>>> minor: Unable to initialize object >>>>>> #002: ../../../src/H5Oattribute.c line 533 in >>>>>> H5O_attr_open_by_name(): can't locate attribute >>>>>> major: Attribute >>>>>> minor: Object not found >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Edeprec.c line 182 in H5Eget_minor(): not a >>>>>> error message ID >>>>>> major: Invalid arguments to routine >>>>>> minor: Inappropriate type >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Adeprec.c line 214 in H5Aopen_name(): can't >>>>>> open attribute >>>>>> major: Attribute >>>>>> minor: Can't open object >>>>>> #001: ../../../src/H5A.c line 865 in H5A_open_by_name(): unable to >>>>>> load attribute info from object header >>>>>> major: Attribute >>>>>> minor: Unable to initialize object >>>>>> #002: ../../../src/H5Oattribute.c line 533 in >>>>>> H5O_attr_open_by_name(): can't locate attribute >>>>>> major: Attribute >>>>>> minor: Object not found >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Edeprec.c line 182 in H5Eget_minor(): not a >>>>>> error message ID >>>>>> major: Invalid arguments to routine >>>>>> minor: Inappropriate type >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Adeprec.c line 214 in H5Aopen_name(): can't >>>>>> open attribute >>>>>> major: Attribute >>>>>> minor: Can't open object >>>>>> #001: ../../../src/H5A.c line 865 in H5A_open_by_name(): unable to >>>>>> load attribute info from object header >>>>>> major: Attribute >>>>>> minor: Unable to initialize object >>>>>> #002: ../../../src/H5Oattribute.c line 533 in >>>>>> H5O_attr_open_by_name(): can't locate attribute >>>>>> major: Attribute >>>>>> minor: Object not found >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Edeprec.c line 182 in H5Eget_minor(): not a >>>>>> error message ID >>>>>> major: Invalid arguments to routine >>>>>> minor: Inappropriate type >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Adeprec.c line 214 in H5Aopen_name(): can't >>>>>> open attribute >>>>>> major: Attribute >>>>>> minor: Can't open object >>>>>> #001: ../../../src/H5A.c line 865 in H5A_open_by_name(): unable to >>>>>> load attribute info from object header >>>>>> major: Attribute >>>>>> minor: Unable to initialize object >>>>>> #002: ../../../src/H5Oattribute.c line 533 in >>>>>> H5O_attr_open_by_name(): can't locate attribute >>>>>> major: Attribute >>>>>> minor: Object not found >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Edeprec.c line 182 in H5Eget_minor(): not a >>>>>> error message ID >>>>>> major: Invalid arguments to routine >>>>>> minor: Inappropriate type >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Adeprec.c line 214 in H5Aopen_name(): can't >>>>>> open attribute >>>>>> major: Attribute >>>>>> minor: Can't open object >>>>>> #001: ../../../src/H5A.c line 865 in H5A_open_by_name(): unable to >>>>>> load attribute info from object header >>>>>> major: Attribute >>>>>> minor: Unable to initialize object >>>>>> #002: ../../../src/H5Oattribute.c line 533 in >>>>>> H5O_attr_open_by_name(): can't locate attribute >>>>>> major: Attribute >>>>>> minor: Object not found >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Edeprec.c line 182 in H5Eget_minor(): not a >>>>>> error message ID >>>>>> major: Invalid arguments to routine >>>>>> minor: Inappropriate type >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Adeprec.c line 214 in H5Aopen_name(): can't >>>>>> open attribute >>>>>> major: Attribute >>>>>> minor: Can't open object >>>>>> #001: ../../../src/H5A.c line 865 in H5A_open_by_name(): unable to >>>>>> load attribute info from object header >>>>>> major: Attribute >>>>>> minor: Unable to initialize object >>>>>> #002: ../../../src/H5Oattribute.c line 533 in >>>>>> H5O_attr_open_by_name(): can't locate attribute >>>>>> major: Attribute >>>>>> minor: Object not found >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Edeprec.c line 182 in H5Eget_minor(): not a >>>>>> error message ID >>>>>> major: Invalid arguments to routine >>>>>> minor: Inappropriate type >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Adeprec.c line 214 in H5Aopen_name(): can't >>>>>> open attribute >>>>>> major: Attribute >>>>>> minor: Can't open object >>>>>> #001: ../../../src/H5A.c line 865 in H5A_open_by_name(): unable to >>>>>> load attribute info from object header >>>>>> major: Attribute >>>>>> minor: Unable to initialize object >>>>>> #002: ../../../src/H5Oattribute.c line 533 in >>>>>> H5O_attr_open_by_name(): can't locate attribute >>>>>> major: Attribute >>>>>> minor: Object not found >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Edeprec.c line 182 in H5Eget_minor(): not a >>>>>> error message ID >>>>>> major: Invalid arguments to routine >>>>>> minor: Inappropriate type >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Adeprec.c line 214 in H5Aopen_name(): can't >>>>>> open attribute >>>>>> major: Attribute >>>>>> minor: Can't open object >>>>>> #001: ../../../src/H5A.c line 865 in H5A_open_by_name(): unable to >>>>>> load attribute info from object header >>>>>> major: Attribute >>>>>> minor: Unable to initialize object >>>>>> #002: ../../../src/H5Oattribute.c line 533 in >>>>>> H5O_attr_open_by_name(): can't locate attribute >>>>>> major: Attribute >>>>>> minor: Object not found >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Edeprec.c line 182 in H5Eget_minor(): not a >>>>>> error message ID >>>>>> major: Invalid arguments to routine >>>>>> minor: Inappropriate type >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Edeprec.c line 182 in H5Eget_minor(): not a >>>>>> error message ID >>>>>> major: Invalid arguments to routine >>>>>> minor: Inappropriate type >>>>>> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 140127245633296: >>>>>> #000: ../../../src/H5Edeprec.c line 182 in H5Eget_minor(): not a >>>>>> error message ID >>>>>> major: Invalid arguments to routine >>>>>> minor: Inappropriate type >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> Thanks. >>>>>> >>>>>> Forest, >>>>>> >>>>>> _______________________________________________ >>>>>> Hdf-forum is for HDF software users discussion. >>>>>> [email protected] >>>>>> http://mail.hdfgroup.org/mailman/listinfo/hdf-forum_hdfgroup.org >>>>>> >>>>>> >>>>>> >>>>>> >>>>> >>>>> _______________________________________________ >>>>> Hdf-forum is for HDF software users discussion. >>>>> [email protected] >>>>> http://mail.hdfgroup.org/mailman/listinfo/hdf-forum_hdfgroup.org >>>>> >>>>> >>>>> >>>>> ------------------------------------------------------------------------ >>>>> >>>>> _______________________________________________ >>>>> Hdf-forum is for HDF software users discussion. >>>>> [email protected] >>>>> http://mail.hdfgroup.org/mailman/listinfo/hdf-forum_hdfgroup.org >>>>> >>>>> >>> >>> _______________________________________________ >>> Hdf-forum is for HDF software users discussion. >>> [email protected] >>> http://mail.hdfgroup.org/mailman/listinfo/hdf-forum_hdfgroup.org >>> >>> >> >> _______________________________________________ >> Hdf-forum is for HDF software users discussion. >> [email protected] >> http://mail.hdfgroup.org/mailman/listinfo/hdf-forum_hdfgroup.org >> >> > > _______________________________________________ > Hdf-forum is for HDF software users discussion. > [email protected] > http://mail.hdfgroup.org/mailman/listinfo/hdf-forum_hdfgroup.org > _______________________________________________ Hdf-forum is for HDF software users discussion. 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