My guess is (assuming you have set your compiler to h5pfc in cmake) that the
link order is wrong. Cmake is adding all your stuff at the end of the link
line, but you need it before the link of hdf5/mpi etc etc
I don't use the h5pfc compiler wrapper, but I set things up as follows - this
help assumes you are using cmake to build hdf5, if not, then I can't help you.
#-----------------------------------------------------------------------------
# Find HDF5
#-----------------------------------------------------------------------------
OPTION(ELEPHANT_USE_HDF5 "Use HDF5 for output files" ON)
IF(ELEPHANT_USE_HDF5)
FIND_PACKAGE(HDF5 "1.8.5" REQUIRED NO_MODULE PATHS "$ENV{ProgramFiles}/HDF5")
IF(HDF5_FOUND)
SET(HDF_LIBRARIES hdf5 hdf5_fortran)
INCLUDE_DIRECTORIES(${HDF5_INCLUDE_DIR})
INCLUDE_DIRECTORIES(${HDF5_INCLUDE_DIR_FORTRAN})
ELSE(HDF5_FOUND)
MESSAGE(FATAL_ERROR "This project requires HDF5 1.8.5 (or later) configured
with CMake")
ENDIF(HDF5_FOUND)
ENDIF(ELEPHANT_USE_HDF5)
# FIND_PACKAGE(HDF5 "1.8.5" REQUIRED NO_MODULE PATHS "$ENV{ProgramFiles}/HDF5")
assumes you are on windows (drop the PATHS $ENV{...} and enter the path to
hdf5-config-version.cmake manually in cmake gui (such as
/apps/eiger/hdf5/1.8.7/gcc-ifort/lib/cmake/hdf5-1.8.7/), basically where you
set cmake install path when you compiled hdf5 + the lib/blah/blah
and then later in your project cmakelists
TARGET_LINK_LIBRARIES(elephant
....
${HDF_LIBRARIES}
)
you may want to do the same for MPI etc etc
HTH
JB
-----Original Message-----
From: [email protected] [mailto:[email protected]] On
Behalf Of Paul Anton Letnes
Sent: 23 February 2011 09:38
To: HDF Users Discussion List
Subject: Re: [Hdf-forum] CMake + hdf5 project
On 23. feb. 2011, at 04.12, Allen D Byrne wrote:
> Paul,
> Looking at your CMakeLists.txt file - does moving the following:
> add_library(Rayleigh2D_Module
> Rayleigh2D_Modules/Rayleigh2D_Module.f90
> Rayleigh2D_Modules/Rayleigh2D_Utils.f90
> Rayleigh2D_Modules/SFL_Error_Handling.f90
> Rayleigh2D_Modules/SFL_Fourier.f90
> Rayleigh2D_Modules/SFL_ISO_Fortran_Env.f90
> Rayleigh2D_Modules/SFL_Logical_Units.f90
> Rayleigh2D_Modules/constants.f90
> Rayleigh2D_Modules/derived_type_module.f90
> Rayleigh2D_Modules/surface_correlated_module.f90
> Rayleigh2D_Modules/surface_util_module.f90
> Rayleigh2D_Modules/zbcg2_module.f90
> Rayleigh2D_Modules/BiCGstab_module.f90
> Rayleigh2D_Modules/R_save.f90
> Rayleigh2D_Modules/version.f90
> )
> above the following help?
> ##################################################
> # Library linking is handled below
> ##################################################
> # Common libraries for all compilers
> target_link_libraries (Rayleigh2D Rayleigh2D_Module FFT_Modules fftw3 hdf5
> hdf5_hl hdf5_fortran hdf5hl_fortran z)
> I think the target: Rayleigh2D_Module needs to be defined before use.
> Allen
Hi, this did nothing. My compilation error remains the same. It is attached
below. Also, I should note that before we started using HDF5 (simply dumping
the results to an ASCII file), these errors did not appear.
But thanks for the suggestion.
Cheers,
Paul.
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5_f.o):
In function `h5close_types_c_':
H5_f.c:(.text+0x34): undefined reference to `H5Tclose'
H5_f.c:(.text+0x78): undefined reference to `H5Tclose'
H5_f.c:(.text+0xa8): undefined reference to `H5Tclose'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5_f.o):
In function `h5open_c_':
H5_f.c:(.text+0x102): undefined reference to `H5open'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5_f.o):
In function `h5close_c_':
H5_f.c:(.text+0x122): undefined reference to `H5close'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5_f.o):
In function `h5get_libversion_c_':
H5_f.c:(.text+0x162): undefined reference to `H5get_libversion'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5_f.o):
In function `h5check_version_c_':
H5_f.c:(.text+0x1a8): undefined reference to `H5check_version'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5_f.o):
In function `h5garbage_collect_c_':
H5_f.c:(.text+0x1b2): undefined reference to `H5garbage_collect'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5_f.o):
In function `h5dont_atexit_c_':
H5_f.c:(.text+0x1d2): undefined reference to `H5dont_atexit'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5_f.o):
In function `h5init_flags_c_':
H5_f.c:(.text+0x2c0): undefined reference to `H5check_version'
H5_f.c:(.text+0x2db): undefined reference to `H5check_version'
H5_f.c:(.text+0x2f7): undefined reference to `H5check_version'
H5_f.c:(.text+0x313): undefined reference to `H5check_version'
H5_f.c:(.text+0x32f): undefined reference to `H5check_version'
H5_f.c:(.text+0x427): undefined reference to `H5FD_core_init'
H5_f.c:(.text+0x42f): undefined reference to `H5FD_family_init'
H5_f.c:(.text+0x438): undefined reference to `H5FD_log_init'
H5_f.c:(.text+0x441): undefined reference to `H5FD_mpio_init'
H5_f.c:(.text+0x44a): undefined reference to `H5FD_multi_init'
H5_f.c:(.text+0x453): undefined reference to `H5FD_sec2_init'
H5_f.c:(.text+0x45c): undefined reference to `H5FD_stdio_init'
H5_f.c:(.text+0x578): undefined reference to `H5open'
H5_f.c:(.text+0x583): undefined reference to `H5P_CLS_FILE_CREATE_g'
H5_f.c:(.text+0x58b): undefined reference to `H5open'
H5_f.c:(.text+0x591): undefined reference to `H5P_CLS_FILE_ACCESS_g'
H5_f.c:(.text+0x59a): undefined reference to `H5open'
H5_f.c:(.text+0x5a0): undefined reference to `H5P_CLS_DATASET_CREATE_g'
H5_f.c:(.text+0x5a9): undefined reference to `H5open'
H5_f.c:(.text+0x5af): undefined reference to `H5P_CLS_DATASET_XFER_g'
H5_f.c:(.text+0x5b8): undefined reference to `H5open'
H5_f.c:(.text+0x5be): undefined reference to `H5P_CLS_FILE_MOUNT_g'
H5_f.c:(.text+0x5cf): undefined reference to `H5open'
H5_f.c:(.text+0x5d5): undefined reference to `H5P_CLS_ROOT_g'
H5_f.c:(.text+0x5de): undefined reference to `H5open'
H5_f.c:(.text+0x5e4): undefined reference to `H5P_CLS_OBJECT_CREATE_g'
H5_f.c:(.text+0x5ed): undefined reference to `H5open'
H5_f.c:(.text+0x5f3): undefined reference to `H5P_CLS_DATASET_ACCESS_g'
H5_f.c:(.text+0x5fc): undefined reference to `H5open'
H5_f.c:(.text+0x602): undefined reference to `H5P_CLS_GROUP_CREATE_g'
H5_f.c:(.text+0x60b): undefined reference to `H5open'
H5_f.c:(.text+0x611): undefined reference to `H5P_CLS_GROUP_ACCESS_g'
H5_f.c:(.text+0x61a): undefined reference to `H5open'
H5_f.c:(.text+0x620): undefined reference to `H5P_CLS_DATATYPE_CREATE_g'
H5_f.c:(.text+0x629): undefined reference to `H5open'
H5_f.c:(.text+0x62f): undefined reference to `H5P_CLS_DATATYPE_ACCESS_g'
H5_f.c:(.text+0x638): undefined reference to `H5open'
H5_f.c:(.text+0x63e): undefined reference to `H5P_CLS_STRING_CREATE_g'
H5_f.c:(.text+0x647): undefined reference to `H5open'
H5_f.c:(.text+0x64d): undefined reference to `H5P_CLS_ATTRIBUTE_CREATE_g'
H5_f.c:(.text+0x656): undefined reference to `H5open'
H5_f.c:(.text+0x65c): undefined reference to `H5P_CLS_OBJECT_COPY_g'
H5_f.c:(.text+0x665): undefined reference to `H5open'
H5_f.c:(.text+0x66b): undefined reference to `H5P_CLS_LINK_CREATE_g'
H5_f.c:(.text+0x674): undefined reference to `H5open'
H5_f.c:(.text+0x689): undefined reference to `H5P_CLS_LINK_ACCESS_g'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5_f.o):
In function `h5init_types_c_':
H5_f.c:(.text+0x9f1): undefined reference to `H5open'
H5_f.c:(.text+0x9f7): undefined reference to `H5T_NATIVE_INT_g'
H5_f.c:(.text+0x9fc): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xa0c): undefined reference to `H5open'
H5_f.c:(.text+0xa12): undefined reference to `H5T_NATIVE_FLOAT_g'
H5_f.c:(.text+0xa17): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xa27): undefined reference to `H5open'
H5_f.c:(.text+0xa2d): undefined reference to `H5T_NATIVE_DOUBLE_g'
H5_f.c:(.text+0xa32): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xa42): undefined reference to `H5open'
H5_f.c:(.text+0xa48): undefined reference to `H5T_FORTRAN_S1_g'
H5_f.c:(.text+0xa4d): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xa63): undefined reference to `H5Tset_size'
H5_f.c:(.text+0xa77): undefined reference to `H5Tset_strpad'
H5_f.c:(.text+0xa87): undefined reference to `H5open'
H5_f.c:(.text+0xa8d): undefined reference to `H5T_STD_REF_OBJ_g'
H5_f.c:(.text+0xa92): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xaa2): undefined reference to `H5open'
H5_f.c:(.text+0xaa8): undefined reference to `H5T_STD_REF_DSETREG_g'
H5_f.c:(.text+0xaad): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xabd): undefined reference to `H5open'
H5_f.c:(.text+0xac3): undefined reference to `H5T_NATIVE_SCHAR_g'
H5_f.c:(.text+0xac8): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xad8): undefined reference to `H5open'
H5_f.c:(.text+0xade): undefined reference to `H5T_NATIVE_SHORT_g'
H5_f.c:(.text+0xae3): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xaf3): undefined reference to `H5open'
H5_f.c:(.text+0xaf9): undefined reference to `H5T_NATIVE_INT_g'
H5_f.c:(.text+0xafe): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xb0e): undefined reference to `H5open'
H5_f.c:(.text+0xb14): undefined reference to `H5T_NATIVE_LLONG_g'
H5_f.c:(.text+0xb19): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xb29): undefined reference to `H5open'
H5_f.c:(.text+0xb2f): undefined reference to `H5T_NATIVE_FLOAT_g'
H5_f.c:(.text+0xb34): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xb44): undefined reference to `H5open'
H5_f.c:(.text+0xb4a): undefined reference to `H5T_NATIVE_DOUBLE_g'
H5_f.c:(.text+0xb4f): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xb5f): undefined reference to `H5open'
H5_f.c:(.text+0xb65): undefined reference to `H5T_NATIVE_LDOUBLE_g'
H5_f.c:(.text+0xb6a): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xb7a): undefined reference to `H5open'
H5_f.c:(.text+0xb80): undefined reference to `H5T_IEEE_F32BE_g'
H5_f.c:(.text+0xb85): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xb96): undefined reference to `H5open'
H5_f.c:(.text+0xb9c): undefined reference to `H5T_IEEE_F32LE_g'
H5_f.c:(.text+0xba1): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xbb3): undefined reference to `H5open'
H5_f.c:(.text+0xbb9): undefined reference to `H5T_IEEE_F64BE_g'
H5_f.c:(.text+0xbbe): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xbd0): undefined reference to `H5open'
H5_f.c:(.text+0xbd6): undefined reference to `H5T_IEEE_F64LE_g'
H5_f.c:(.text+0xbdb): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xbed): undefined reference to `H5open'
H5_f.c:(.text+0xbf3): undefined reference to `H5T_STD_I8BE_g'
H5_f.c:(.text+0xbf8): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xc09): undefined reference to `H5open'
H5_f.c:(.text+0xc0f): undefined reference to `H5T_STD_I8LE_g'
H5_f.c:(.text+0xc14): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xc25): undefined reference to `H5open'
H5_f.c:(.text+0xc2b): undefined reference to `H5T_STD_I16BE_g'
H5_f.c:(.text+0xc30): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xc41): undefined reference to `H5open'
H5_f.c:(.text+0xc47): undefined reference to `H5T_STD_I16LE_g'
H5_f.c:(.text+0xc4c): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xc5d): undefined reference to `H5open'
H5_f.c:(.text+0xc63): undefined reference to `H5T_STD_I32BE_g'
H5_f.c:(.text+0xc68): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xc79): undefined reference to `H5open'
H5_f.c:(.text+0xc7f): undefined reference to `H5T_STD_I32LE_g'
H5_f.c:(.text+0xc84): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xc95): undefined reference to `H5open'
H5_f.c:(.text+0xc9b): undefined reference to `H5T_STD_I64BE_g'
H5_f.c:(.text+0xca0): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xcb1): undefined reference to `H5open'
H5_f.c:(.text+0xcb7): undefined reference to `H5T_STD_I64LE_g'
H5_f.c:(.text+0xcbc): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xccd): undefined reference to `H5open'
H5_f.c:(.text+0xcd3): undefined reference to `H5T_STD_U8BE_g'
H5_f.c:(.text+0xcd8): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xce9): undefined reference to `H5open'
H5_f.c:(.text+0xcef): undefined reference to `H5T_STD_U8LE_g'
H5_f.c:(.text+0xcf4): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xd05): undefined reference to `H5open'
H5_f.c:(.text+0xd0b): undefined reference to `H5T_STD_U16BE_g'
H5_f.c:(.text+0xd10): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xd21): undefined reference to `H5open'
H5_f.c:(.text+0xd27): undefined reference to `H5T_STD_U16LE_g'
H5_f.c:(.text+0xd2c): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xd3d): undefined reference to `H5open'
H5_f.c:(.text+0xd43): undefined reference to `H5T_STD_U32BE_g'
H5_f.c:(.text+0xd48): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xd59): undefined reference to `H5open'
H5_f.c:(.text+0xd5f): undefined reference to `H5T_STD_U32LE_g'
H5_f.c:(.text+0xd64): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xd71): undefined reference to `H5open'
H5_f.c:(.text+0xd77): undefined reference to `H5T_STD_U64BE_g'
H5_f.c:(.text+0xd7c): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xd89): undefined reference to `H5open'
H5_f.c:(.text+0xd8f): undefined reference to `H5T_STD_U64LE_g'
H5_f.c:(.text+0xd94): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xda1): undefined reference to `H5open'
H5_f.c:(.text+0xda7): undefined reference to `H5T_C_S1_g'
H5_f.c:(.text+0xdac): undefined reference to `H5Tcopy'
H5_f.c:(.text+0xdc3): undefined reference to `H5Tset_size'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dcreate_c_':
H5Df.c:(.text+0x5c): undefined reference to `H5Dcreate2'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dopen_c_':
H5Df.c:(.text+0xc9): undefined reference to `H5Dopen2'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dwritec_c_':
H5Df.c:(.text+0xfd): undefined reference to `H5Dwrite'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dwritec_s_c_':
H5Df.c:(.text+0x12d): undefined reference to `H5Dwrite'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dwritec_1_c_':
H5Df.c:(.text+0x15d): undefined reference to `H5Dwrite'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dwritec_2_c_':
H5Df.c:(.text+0x18d): undefined reference to `H5Dwrite'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dwritec_3_c_':
H5Df.c:(.text+0x1bd): undefined reference to `H5Dwrite'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):H5Df.c:(.text+0x1ed):
more undefined references to `H5Dwrite' follow
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dreadc_c_':
H5Df.c:(.text+0x8dd): undefined reference to `H5Dread'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dreadc_s_c_':
H5Df.c:(.text+0x90d): undefined reference to `H5Dread'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dreadc_1_c_':
H5Df.c:(.text+0x93d): undefined reference to `H5Dread'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dreadc_2_c_':
H5Df.c:(.text+0x96d): undefined reference to `H5Dread'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dreadc_3_c_':
H5Df.c:(.text+0x99d): undefined reference to `H5Dread'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):H5Df.c:(.text+0x9cd):
more undefined references to `H5Dread' follow
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dclose_c_':
H5Df.c:(.text+0x10b4): undefined reference to `H5Dclose'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dget_space_c_':
H5Df.c:(.text+0x10d7): undefined reference to `H5Dget_space'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dget_type_c_':
H5Df.c:(.text+0x10f7): undefined reference to `H5Dget_type'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dget_create_plist_c_':
H5Df.c:(.text+0x1117): undefined reference to `H5Dget_create_plist'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dset_extent_c_':
H5Df.c:(.text+0x114a): undefined reference to `H5Dget_space'
H5Df.c:(.text+0x115e): undefined reference to `H5Sget_simple_extent_ndims'
H5Df.c:(.text+0x1169): undefined reference to `H5Sclose'
H5Df.c:(.text+0x11ec): undefined reference to `H5Dset_extent'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dget_storage_size_c_':
H5Df.c:(.text+0x1237): undefined reference to `H5Dget_storage_size'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dvlen_get_max_len_c_':
H5Df.c:(.text+0x1270): undefined reference to `H5Sget_select_npoints'
H5Df.c:(.text+0x12a1): undefined reference to `H5Dread'
H5Df.c:(.text+0x12d8): undefined reference to `H5Dvlen_reclaim'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dwrite_vl_integer_c_':
H5Df.c:(.text+0x1535): undefined reference to `H5Dwrite'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dread_vl_integer_c_':
H5Df.c:(.text+0x15bb): undefined reference to `H5Sget_select_npoints'
H5Df.c:(.text+0x1611): undefined reference to `H5Dread'
H5Df.c:(.text+0x1678): undefined reference to `H5Dvlen_reclaim'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dwrite_vl_string_c_':
H5Df.c:(.text+0x1792): undefined reference to `H5Dwrite'
H5Df.c:(.text+0x17b0): undefined reference to `H5Dvlen_reclaim'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dread_vl_string_c_':
H5Df.c:(.text+0x1862): undefined reference to `H5Dread'
H5Df.c:(.text+0x1965): undefined reference to `H5Dvlen_reclaim'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dwrite_vl_real_c_':
H5Df.c:(.text+0x1c55): undefined reference to `H5Dwrite'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dread_vl_real_c_':
H5Df.c:(.text+0x1cdb): undefined reference to `H5Sget_select_npoints'
H5Df.c:(.text+0x1d31): undefined reference to `H5Dread'
H5Df.c:(.text+0x1d98): undefined reference to `H5Dvlen_reclaim'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dfillc_c_':
H5Df.c:(.text+0x1dd0): undefined reference to `H5Dfill'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dfill_c_':
H5Df.c:(.text+0x1e00): undefined reference to `H5Dfill'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dfill_integer_c_':
H5Df.c:(.text+0x1e30): undefined reference to `H5Dfill'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dfill_real_c_':
H5Df.c:(.text+0x1e60): undefined reference to `H5Dfill'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dfill_double_c_':
H5Df.c:(.text+0x1e90): undefined reference to `H5Dfill'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dget_space_status_c_':
H5Df.c:(.text+0x1ebf): undefined reference to `H5Dget_space_status'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dcreate_anon_c_':
H5Df.c:(.text+0x1ef1): undefined reference to `H5Dcreate_anon'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Df.o):
In function `h5dget_access_plist_c_':
H5Df.c:(.text+0x1f17): undefined reference to `H5Dget_access_plist'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fcreate_c_':
H5Ff.c:(.text+0x30): undefined reference to `H5Fcreate'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fflush_c_':
H5Ff.c:(.text+0x66): undefined reference to `H5Fflush'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fmount_c_':
H5Ff.c:(.text+0xb1): undefined reference to `H5Fmount'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5funmount_c_':
H5Ff.c:(.text+0x115): undefined reference to `H5Funmount'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fopen_c_':
H5Ff.c:(.text+0x178): undefined reference to `H5Fopen'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5freopen_c_':
H5Ff.c:(.text+0x1b7): undefined reference to `H5Freopen'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fget_create_plist_c_':
H5Ff.c:(.text+0x1d7): undefined reference to `H5Fget_create_plist'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fget_access_plist_c_':
H5Ff.c:(.text+0x1f7): undefined reference to `H5Fget_access_plist'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fis_hdf5_c_':
H5Ff.c:(.text+0x22c): undefined reference to `H5Fis_hdf5'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fclose_c_':
H5Ff.c:(.text+0x264): undefined reference to `H5Fclose'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fget_obj_count_c_':
H5Ff.c:(.text+0x28a): undefined reference to `H5Fget_obj_count'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fget_obj_ids_c_':
H5Ff.c:(.text+0x2ec): undefined reference to `H5Fget_obj_ids'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fget_freespace_c_':
H5Ff.c:(.text+0x427): undefined reference to `H5Fget_freespace'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fget_name_c_':
H5Ff.c:(.text+0x486): undefined reference to `H5Fget_name'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Ff.o):
In function `h5fget_filesize_c_':
H5Ff.c:(.text+0x4df): undefined reference to `H5Fget_filesize'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gcreate_c_':
H5Gf.c:(.text+0x3f): undefined reference to `H5open'
H5Gf.c:(.text+0x45): undefined reference to `H5P_CLS_GROUP_CREATE_g'
H5Gf.c:(.text+0x4a): undefined reference to `H5Pcreate'
H5Gf.c:(.text+0x5e): undefined reference to `H5Pset_local_heap_size_hint'
H5Gf.c:(.text+0x76): undefined reference to `H5Gcreate2'
H5Gf.c:(.text+0x8e): undefined reference to `H5Pclose'
H5Gf.c:(.text+0xcb): undefined reference to `H5Gcreate2'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gopen_c_':
H5Gf.c:(.text+0x119): undefined reference to `H5Gopen2'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gget_obj_info_idx_c_':
H5Gf.c:(.text+0x1aa): undefined reference to `H5Gopen2'
H5Gf.c:(.text+0x1ca): undefined reference to `H5Lget_name_by_idx'
H5Gf.c:(.text+0x1f2): undefined reference to `H5Oget_info_by_idx'
H5Gf.c:(.text+0x225): undefined reference to `H5Gclose'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gn_members_c_':
H5Gf.c:(.text+0x29b): undefined reference to `H5Gget_info_by_name'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gclose_c_':
H5Gf.c:(.text+0x2d4): undefined reference to `H5Gclose'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5glink_c_':
H5Gf.c:(.text+0x34b): undefined reference to `H5Lcreate_hard'
H5Gf.c:(.text+0x369): undefined reference to `H5Lcreate_soft'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5glink2_c_':
H5Gf.c:(.text+0x405): undefined reference to `H5Lcreate_hard'
H5Gf.c:(.text+0x422): undefined reference to `H5Lcreate_soft'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gunlink_c_':
H5Gf.c:(.text+0x48e): undefined reference to `H5Ldelete'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gmove_c_':
H5Gf.c:(.text+0x513): undefined reference to `H5Lmove'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gmove2_c_':
H5Gf.c:(.text+0x5a8): undefined reference to `H5Lmove'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gget_linkval_c_':
H5Gf.c:(.text+0x662): undefined reference to `H5Lget_val'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gset_comment_c_':
H5Gf.c:(.text+0x6ed): undefined reference to `H5Oset_comment_by_name'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gget_comment_c_':
H5Gf.c:(.text+0x78c): undefined reference to `H5Oget_comment_by_name'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gcreate_anon_c_':
H5Gf.c:(.text+0x7dc): undefined reference to `H5Gcreate_anon'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gget_create_plist_c_':
H5Gf.c:(.text+0x807): undefined reference to `H5Gget_create_plist'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gget_info_c_':
H5Gf.c:(.text+0x843): undefined reference to `H5Gget_info'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gget_info_by_idx_c_':
H5Gf.c:(.text+0x8fe): undefined reference to `H5Gget_info_by_idx'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Gf.o):
In function `h5gget_info_by_name_c_':
H5Gf.c:(.text+0x9c6): undefined reference to `H5Gget_info_by_name'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5lcopy_c_':
H5Lf.c:(.text+0x66): undefined reference to `H5Lcopy'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5lcreate_external_c_':
H5Lf.c:(.text+0x12a): undefined reference to `H5Lcreate_external'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5ldelete_c_':
H5Lf.c:(.text+0x1a0): undefined reference to `H5Ldelete'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5lcreate_soft_c_':
H5Lf.c:(.text+0x22c): undefined reference to `H5Lcreate_soft'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5lcreate_hard_c_':
H5Lf.c:(.text+0x2d6): undefined reference to `H5Lcreate_hard'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5ldelete_by_idx_c_':
H5Lf.c:(.text+0x35a): undefined reference to `H5Ldelete_by_idx'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5lexists_c_':
H5Lf.c:(.text+0x3c7): undefined reference to `H5Lexists'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5lget_info_c_':
H5Lf.c:(.text+0x447): undefined reference to `H5Lget_info'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5lget_info_by_idx_c_':
H5Lf.c:(.text+0x511): undefined reference to `H5Lget_info_by_idx'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5lis_registered_c_':
H5Lf.c:(.text+0x5a4): undefined reference to `H5Lis_registered'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5lmove_c_':
H5Lf.c:(.text+0x616): undefined reference to `H5Lmove'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5lget_name_by_idx_c_':
H5Lf.c:(.text+0x6df): undefined reference to `H5Lget_name_by_idx'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Lf.o):
In function `h5lget_val_c_':
H5Lf.c:(.text+0x773): undefined reference to `H5Lget_val'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5screate_simple_c_':
H5Sf.c:(.text+0xde): undefined reference to `H5Screate_simple'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sclose_c_':
H5Sf.c:(.text+0x114): undefined reference to `H5Sclose'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5screate_c_':
H5Sf.c:(.text+0x137): undefined reference to `H5Screate'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5scopy_c_':
H5Sf.c:(.text+0x157): undefined reference to `H5Scopy'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sget_select_hyper_nblocks_c_':
H5Sf.c:(.text+0x177): undefined reference to `H5Sget_select_hyper_nblocks'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sget_select_elem_npoints_c_':
H5Sf.c:(.text+0x197): undefined reference to `H5Sget_select_elem_npoints'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sget_select_hyper_blocklist_c_':
H5Sf.c:(.text+0x1cc): undefined reference to `H5Sget_simple_extent_ndims'
H5Sf.c:(.text+0x211): undefined reference to `H5Sget_select_hyper_blocklist'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sget_select_bounds_c_':
H5Sf.c:(.text+0x400): undefined reference to `H5Sget_simple_extent_ndims'
H5Sf.c:(.text+0x427): undefined reference to `H5Sget_select_bounds'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sget_select_elem_pointlist_c_':
H5Sf.c:(.text+0x68b): undefined reference to `H5Sget_simple_extent_ndims'
H5Sf.c:(.text+0x6cb): undefined reference to `H5Sget_select_elem_pointlist'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sselect_all_c_':
H5Sf.c:(.text+0x744): undefined reference to `H5Sselect_all'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sselect_none_c_':
H5Sf.c:(.text+0x764): undefined reference to `H5Sselect_none'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sselect_valid_c_':
H5Sf.c:(.text+0x787): undefined reference to `H5Sselect_valid'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sget_simple_extent_npoints_c_':
H5Sf.c:(.text+0x7a7): undefined reference to `H5Sget_simple_extent_npoints'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sget_select_npoints_c_':
H5Sf.c:(.text+0x7c7): undefined reference to `H5Sget_select_npoints'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sget_simple_extent_ndims_c_':
H5Sf.c:(.text+0x7e7): undefined reference to `H5Sget_simple_extent_ndims'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sget_simple_extent_type_c_':
H5Sf.c:(.text+0x807): undefined reference to `H5Sget_simple_extent_type'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5soffset_simple_c_':
H5Sf.c:(.text+0x835): undefined reference to `H5Sget_simple_extent_ndims'
H5Sf.c:(.text+0x8b3): undefined reference to `H5Soffset_simple'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sset_extent_simple_c_':
H5Sf.c:(.text+0x9c8): undefined reference to `H5Sset_extent_simple'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sget_simple_extent_dims_c_':
H5Sf.c:(.text+0xa0b): undefined reference to `H5Sget_simple_extent_ndims'
H5Sf.c:(.text+0xa32): undefined reference to `H5Sget_simple_extent_dims'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sis_simple_c_':
H5Sf.c:(.text+0xb97): undefined reference to `H5Sis_simple'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sextent_copy_c_':
H5Sf.c:(.text+0xbb6): undefined reference to `H5Sextent_copy'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sset_extent_none_c_':
H5Sf.c:(.text+0xbd4): undefined reference to `H5Sset_extent_none'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sselect_hyperslab_c_':
H5Sf.c:(.text+0xc17): undefined reference to `H5Sget_simple_extent_ndims'
H5Sf.c:(.text+0xd5f): undefined reference to `H5Sselect_hyperslab'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sget_select_type_c_':
H5Sf.c:(.text+0xda7): undefined reference to `H5Sget_select_type'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sselect_elements_c_':
H5Sf.c:(.text+0xddf): undefined reference to `H5Sget_simple_extent_ndims'
H5Sf.c:(.text+0xf39): undefined reference to `H5Sselect_elements'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sdecode_c_':
H5Sf.c:(.text+0xf85): undefined reference to `H5Sdecode'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sencode_c_':
H5Sf.c:(.text+0xfc5): undefined reference to `H5Sencode'
H5Sf.c:(.text+0x100c): undefined reference to `H5Sencode'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5_fortran.a(H5Sf.o):
In function `h5sextent_equal_c_':
H5Sf.c:(.text+0x1049): undefined reference to `H5Sextent_equal'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltmake_dataset_c_':
H5LTfc.c:(.text+0x148): undefined reference to `H5LTmake_dataset'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltmake_dataset_int1_c_':
H5LTfc.c:(.text+0x308): undefined reference to `H5LTmake_dataset'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltmake_dataset_int2_c_':
H5LTfc.c:(.text+0x4c8): undefined reference to `H5LTmake_dataset'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltmake_dataset_int3_c_':
H5LTfc.c:(.text+0x688): undefined reference to `H5LTmake_dataset'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltmake_dataset_fl1_c_':
H5LTfc.c:(.text+0x848): undefined reference to `H5LTmake_dataset'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):H5LTfc.c:(.text+0xa08):
more undefined references to `H5LTmake_dataset' follow
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltread_dataset_c_':
H5LTfc.c:(.text+0x2183): undefined reference to `H5LTread_dataset'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltread_dataset_int1_c_':
H5LTfc.c:(.text+0x21f3): undefined reference to `H5LTread_dataset'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltread_dataset_int2_c_':
H5LTfc.c:(.text+0x2263): undefined reference to `H5LTread_dataset'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltread_dataset_int3_c_':
H5LTfc.c:(.text+0x22d3): undefined reference to `H5LTread_dataset'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltread_dataset_fl1_c_':
H5LTfc.c:(.text+0x2343): undefined reference to `H5LTread_dataset'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):H5LTfc.c:(.text+0x23b3):
more undefined references to `H5LTread_dataset' follow
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltmake_dataset_string_c_':
H5LTfc.c:(.text+0x29ee): undefined reference to `H5LTmake_dataset_string'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltread_dataset_string_c_':
H5LTfc.c:(.text+0x2a5f): undefined reference to `H5LTread_dataset_string'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltset_attribute_int_c_':
H5LTfc.c:(.text+0x2b04): undefined reference to `H5LTset_attribute_int'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltset_attribute_float_c_':
H5LTfc.c:(.text+0x2bb4): undefined reference to `H5LTset_attribute_float'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltset_attribute_double_c_':
H5LTfc.c:(.text+0x2c64): undefined reference to `H5LTset_attribute_double'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltset_attribute_string_c_':
H5LTfc.c:(.text+0x2d2a): undefined reference to `H5LTset_attribute_string'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltget_attribute_int_c_':
H5LTfc.c:(.text+0x2def): undefined reference to `H5LTget_attribute_int'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltget_attribute_float_c_':
H5LTfc.c:(.text+0x2e8f): undefined reference to `H5LTget_attribute_float'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltget_attribute_double_c_':
H5LTfc.c:(.text+0x2f2f): undefined reference to `H5LTget_attribute_double'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltget_attribute_string_c_':
H5LTfc.c:(.text+0x2fcf): undefined reference to `H5LTget_attribute_string'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltget_dataset_ndims_c_':
H5LTfc.c:(.text+0x3041): undefined reference to `H5LTget_dataset_ndims'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltfind_dataset_c_':
H5LTfc.c:(.text+0x30a0): undefined reference to `H5LTfind_dataset'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltget_dataset_info_c_':
H5LTfc.c:(.text+0x3121): undefined reference to `H5LTget_dataset_info'
H5LTfc.c:(.text+0x3151): undefined reference to `H5LTget_dataset_ndims'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltget_attribute_ndims_c_':
H5LTfc.c:(.text+0x3303): undefined reference to `H5LTget_attribute_ndims'
/share/apps/modulessoftware/hdf5/hdf-5.1.8.5-intel/lib/libhdf5hl_fortran.a(H5LTfc.o):
In function `h5ltget_attribute_info_c_':
H5LTfc.c:(.text+0x33c7): undefined reference to `H5LTget_attribute_info'
H5LTfc.c:(.text+0x340c): undefined reference to `H5LTget_attribute_ndims'
make[2]: *** [Rayleigh2D] Error 1
make[1]: *** [CMakeFiles/Rayleigh2D.dir/all] Error 2
make: *** [all] Error 2
_______________________________________________
Hdf-forum is for HDF software users discussion.
[email protected]
http://mail.hdfgroup.org/mailman/listinfo/hdf-forum_hdfgroup.org
_______________________________________________
Hdf-forum is for HDF software users discussion.
[email protected]
http://mail.hdfgroup.org/mailman/listinfo/hdf-forum_hdfgroup.org
