hi 

Checking with h5dump yielded these results. So the compression is indeed active 
and the dataspace size is the same but not the storage layout size.I get a lot 
larger storage size with the compression. 
Do you have  any clue as to how to set dynamically the chunk size  to avoid 
this issue ? ( i'm supposing it comes from our chunk size of course .. maybe 
i'm wrong). 

Gabriel
 

      DATASET "bnd_tri->elem" {
         DATATYPE  H5T_STD_I32LE
         DATASPACE  SIMPLE { ( 1706886 ) / ( 1706886 ) }
         STORAGE_LAYOUT {
            CHUNKED ( 682754 )
            SIZE 8193048 (0.833:1 COMPRESSION)
          }
         FILTERS {
            COMPRESSION DEFLATE { LEVEL 6 }
         }
         FILLVALUE {
            FILL_TIME H5D_FILL_TIME_IFSET
            VALUE  0
         }
         ALLOCATION_TIME {
            H5D_ALLOC_TIME_INCR
         }
      }


      DATASET "bnd_tri->elem" {
         DATATYPE  H5T_STD_I32LE
         DATASPACE  SIMPLE { ( 1706886 ) / ( 1706886 ) }
         STORAGE_LAYOUT {
            CONTIGUOUS
            SIZE 6827544
            OFFSET 122165496
         }
         FILTERS {
            NONE
         }
         FILLVALUE {
            FILL_TIME H5D_FILL_TIME_IFSET
            VALUE  0
         }
         ALLOCATION_TIME {
            H5D_ALLOC_TIME_LATE
         }




________________________________
 De : Alligator <[email protected]>
À : "[email protected]" <[email protected]> 
Envoyé le : Mercredi 6 juin 2012 22h25
Objet : [Hdf-forum] HDF GZ compression increases file size ??
 

Hi  i'm using hdf 1.8.2 
I've been playing with the standard GZ filter to compress my files and
when treating some files i found out it actually increased the file size !  Has 
anyone else seen this ? even level 1 comrpession or level 6
compression yield the same file size and an increase of almost 50% in file
size.  Is it possible that chunk size is responsible of this ? Is there an
intelligent way to set this parameter then ?  thanks a lot for any help you 
might provide 
Pablo
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