Hi Andy,
Our HDF5/XML development is in halt because there is little demand for it.
Could you give us more details on what exact you need for HDF5/XML?
Assume what you have now:
1) XML files based on your XML standard or schema
2) Raw data in binary
Assume below is what you need
1) convert XML structure to HDF5 file structure
2) import the data to HDF5 datasets
Here is what you need:
1) an XSLT to transform your XML file to HDF5 XML files
2) generate HDF5 files from your HDF5 XML files.
#1) should be straightforward.
#2) can be hard. we currently do not have a tool to convert XML to
HDF5.
FYI: we are moving to support HDF5/JSON. The work is still in R&D
stage. When HDF5/JSON is available, you can write an XSLT to convert
your XML files to HDF5 JSON.
Thanks
--pc
On 4/11/2013 10:07 AM, mdehsadn wrote:
Could I ask if there has been progress on HDF5/XML?
I am part of a initiative developing data format standards for biochemical
data. We already have an established XML based standard, where data arrays
are stored as Base-64 encoded binary. These files are averaging about 2Gb or
more each now. We want to establish a sister binary format, quite possibly
based on HDF5. It seems that with HDF5/XML, we could simply create an XSLT
transform and that would be it. Otherwise, we would have to describe the
mapping and implement convertors in C or Java.
Kind regards,
Andy
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