On my University's cluster, I've built HDF5 1.8.7 using the Intel 11.1 and
Intel 12.0 suites without any issue. On my personal computer, running
Scientific Linux 6.4, I have Intel 14.0 and cannot built either 1.8.7 or
1.8.11. On both versions, I get the same error under the Fortran tests. I
compile it with zlib, and properly exporting the Intel compilers (export CC=icc
&& export FC=ifort && export FCC=icpc), using
$> ./configure --enable-fortran --with-zlib=/usr/local/zlib-1.8.7
I have also tried different permutations involving --enable-cxx,
--disable-shared, and removing the --with-zlib flags, but nothing has changed
the SIGSEGV error I get:
==========================
FORTRAN tests
==========================
FORTRANLIB_TEST is linked with HDF5 Library version 1.8 release 11
Mounting test PASSED
Reopen test PASSED
File open/close test PASSED
File free space test PASSED
Dataset test PASSED
Extendible dataset test
PASSED
Basic dataspace test
PASSED
Reference to object test
PASSED
Reference to dataset region test
PASSED
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
fortranlib_test 0000000000713379 Unknown Unknown Unknown
fortranlib_test 0000000000711CF0 Unknown Unknown Unknown
fortranlib_test 00000000006E7AA2 Unknown Unknown Unknown
fortranlib_test 00000000006CD9B3 Unknown Unknown Unknown
fortranlib_test 00000000006A403B Unknown Unknown Unknown
libpthread.so.0 0000003CBDC0F500 Unknown Unknown Unknown
fortranlib_test 000000000043676C Unknown Unknown Unknown
fortranlib_test 0000000000429D3D Unknown Unknown Unknown
fortranlib_test 0000000000417B0B Unknown Unknown Unknown
fortranlib_test 0000000000404CEC Unknown Unknown Unknown
fortranlib_test 00000000004048D6 Unknown Unknown Unknown
libc.so.6 0000003CBD41ECDD Unknown Unknown Unknown
fortranlib_test 00000000004047C9 Unknown Unknown Unknown
I have zero issues if I install this using the gcc compilers, but my code needs
the Intel compilers. Is this an error related to the newer version of the Intel
compiler, or is this something that I've done wrong?_______________________________________________
Hdf-forum is for HDF software users discussion.
[email protected]
http://mail.lists.hdfgroup.org/mailman/listinfo/hdf-forum_lists.hdfgroup.org