On 01/21/2014 02:37 AM, Matthieu Dorier wrote:
Indeed that was the problem, one of the groups was not closed.
Sometimes it can be hard to figure out which HDF doodad is still open.
I use this (c code) snippet to point to the culprit:
norphans = H5Fget_obj_count(file->file_id, H5F_OBJ_ALL);
if (norphans > 1) { /* expect 1 for the file we have not closed */
int i;
H5O_info_t info;
char name[64];
hid_t * objects = calloc(norphans, sizeof(hid_t));
H5Fget_obj_ids(file->file_id, H5F_OBJ_ALL, -1, objects);
for (i=0; i<norphans; i++) {
H5Oget_info(objects[i], &info);
H5Iget_name(objects[i], name, 64);
printf("%d of %zd things still open: %d with name %s of type
%d", i, norphans, objects[i], name, info.type);
}
}
==rob
--
Rob Latham
Mathematics and Computer Science Division
Argonne National Lab, IL USA
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