Hello Guillermo, Can you try the latest release of HDF5, version 1.8.12? You can obtain it from this page:
http://www.hdfgroup.org/HDF5/release/obtainsrc.html We see a problem in the output that you sent that was fixed a couple of releases ago. We think it is the cause of the issue, and that using the latest release will solve this problem. Let us know whether or not that helps. Thanks! -Barbara [email protected] From: Hdf-forum [mailto:[email protected]] On Behalf Of Guillermo Marco Puche Sent: Friday, March 14, 2014 8:25 AM To: [email protected] Subject: [Hdf-forum] Centos 5 gcc 4.8.2 error installing hdf 1.8.8 Hello, I'm trying to compile hdf 1.8.8 on my CentOS 5 machine. I'm getting a lot of warnings and a final error when I try to compile hdf 1.8.8. Configure command I've used is the following: ./configure --prefix=/share/apps/local/hdf5_1.8.8 I attach the suspicious log configure:14906: result: no configure:14910: checking for shl_load in -ldld configure:14943: /share/apps/local/gcc/4.8.2/bin/gcc -o conftest conftest.c -ldld >&5 /usr/bin/ld: cannot find -ldld collect2: error: ld returned 1 exit status configure:14943: $? = 1 configure:15327: $? = 0 /share/apps/local/gcc/4.8.2/lib/: cannot read file data: Is a directory Check make log attached. Here are compiler specs: gcc -v Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/share/apps/local/gcc/4.8.2/libexec/gcc/x86_64-unknown-linux-gnu/4.8.2/lto-wrapper Target: x86_64-unknown-linux-gnu Configured with: ../configure --prefix=/share/apps/local/gcc/4.8.2 --with-mpfr=/share/apps/local/gcc/4.8.2 --with-gmp=/share/apps/local/gcc/4.8.2 --with-as=/share/apps/local/binutils/2.24/bin/as --enable-languages=c,c++,fortran g++ -v Using built-in specs. COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/share/apps/local/gcc/4.8.2/libexec/gcc/x86_64-unknown-linux-gnu/4.8.2/lto-wrapper Target: x86_64-unknown-linux-gnu Configured with: ../configure --prefix=/share/apps/local/gcc/4.8.2 --with-mpfr=/share/apps/local/gcc/4.8.2 --with-gmp=/share/apps/local/gcc/4.8.2 --with-as=/share/apps/local/binutils/2.24/bin/as --enable-languages=c,c++,fortran Thread model: posix gcc version 4.8.2 (GCC) Thank you very much. Best regards, Guillermo.
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