On 06/21/2016 01:04 PM, Binh-Minh Ribler wrote:
Dear HDF4 users,
We are preparing to release HDF 4.2.12 in less than two weeks. In this
release, Java HDF JNI library is integrated into the HDF repository
and a few bug fixes and improvements are done in tools and library
functions. Please try on your platforms and let us know if you see any
problems.
This pre-release has an issue your older ones do as well. When I try to
build with gcc 5.3.0 at NAS at NASA Ames I get:
configure: error: linking to Fortran libraries from C fails
See `config.log' for more details
I've attached my config.log. I believe the issue is due to the oddity of
how gcc5 was built at NAS using pkgsrc or spack or something; the
'-Wl,-R' in 'gcc -v' is my prime culprit. It's like HDF4 is seeing -Wl
flags for ld and thinking that -R then goes right to gcc?
Now, I have in the past built GCC myself with a very simple configure
that doesn't have the pkgsrc or anything bits the system folks there
build with and it works (with 4.2.11), so that's why I suspect the -Wl bits.
Matt
--
Matt Thompson, SSAI, Sr Scientific Programmer/Analyst
NASA GSFC, Global Modeling and Assimilation Office
Code 610.1, 8800 Greenbelt Rd, Greenbelt, MD 20771
Phone: 301-614-6712 Fax: 301-614-6246
http://science.gsfc.nasa.gov/sed/bio/matthew.thompson
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by HDF configure 4.2.12-pre1, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ ./configure --prefix=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux --program-suffix=-hdf4 --includedir=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/hdf --with-jpeg=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/jpeg,/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/lib --with-szlib=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/szlib,/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/lib --with-zlib=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/zlib,/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/lib --disable-netcdf CFLAGS=-fPIC CC=gcc FC=gfortran CXX=g++
## --------- ##
## Platform. ##
## --------- ##
hostname = r601i1n9
uname -m = x86_64
uname -r = 3.0.101-68.1.20160209-nasa
uname -s = Linux
uname -v = #1 SMP Thu Feb 11 23:39:26 UTC 2016 (ed01a9f)
/usr/bin/uname -p = unknown
/bin/uname -X = unknown
/bin/arch = x86_64
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/bin
PATH: /nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/bin
PATH: /nasa/pkgsrc/2015Q4/gcc5/bin
PATH: /u/scicon/tools/opt/cmake_3_5_2/bin
PATH: /nasa/vim/7.4/bin
PATH: /nasa/sles11/git/2.4.5/bin
PATH: /nasa/pkgsrc/python/2.7.11/bin
PATH: /nasa/svn/1.6.21/bin
PATH: /nasa/htop/1.0.1/bin
PATH: .
PATH: /u/mathomp4/bin
PATH: /u/mathomp4/cvstools
PATH: /nobackup/gmao_SIteam/Utilities/opengrads/Contents
PATH: .
PATH: /u/mathomp4/bin
PATH: /u/mathomp4/cvstools
PATH: /nobackup/gmao_SIteam/Utilities/opengrads/Contents
PATH: /opt/sgi/sbin
PATH: /opt/sgi/bin
PATH: /nobackup/gmao_SIteam/Baselibs/GMAO-Baselibs-4_0_7/x86_64-unknown-linux-gnu/pgfortran_16.5-openmpi_1.10.2/Linux/bin
PATH: .
PATH: /u/mathomp4/bin
PATH: /u/mathomp4/cvstools
PATH: /nobackup/gmao_SIteam/Utilities/opengrads/Contents
PATH: /usr/local/bin
PATH: /usr/bin
PATH: /bin
PATH: /usr/X11R6/bin
PATH: /PBS/bin
PATH: /usr/sbin
PATH: /sbin
PATH: /opt/c3/bin
PATH: /opt/sgi/sbin
PATH: /opt/sgi/bin
PATH: /opt/c3/bin
PATH: /nasa/xxdiff/3.2-8.1/usr/bin
PATH: /nasa/imagemagick/6.4.0-3/bin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:2829: checking for a BSD-compatible install
configure:2897: result: /usr/bin/install -c
configure:2908: checking whether build environment is sane
configure:2963: result: yes
configure:3001: WARNING: 'missing' script is too old or missing
configure:3114: checking for a thread-safe mkdir -p
configure:3153: result: /bin/mkdir -p
configure:3160: checking for gawk
configure:3176: found /usr/bin/gawk
configure:3187: result: gawk
configure:3198: checking whether make sets $(MAKE)
configure:3220: result: yes
configure:3249: checking whether make supports nested variables
configure:3266: result: yes
configure:3403: checking whether to enable maintainer-specific portions of Makefiles
configure:3412: result: no
configure:3444: checking shell variables initial values
ACLOCAL=aclocal-1.14
AMTAR='$${TAR-tar}'
AM_BACKSLASH='\'
AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
AM_DEFAULT_VERBOSITY=1
AM_V='$(V)'
AUTOCONF=autoconf
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AUTOMAKE=automake-1.14
AWK=gawk
BASEMANPATH=/u/mathomp4/man:/u/mathomp4/share/man:/PBS/man:/nasa/python/2.7.9/man:/nasa/htop/1.0.1/share/man:/nasa/svn/1.6.11/share/man:/opt/c3/man:/opt/sgi/share/man:/nasa/xxdiff/3.2-8.1/usr/share/man:/usr/share/man:/usr/local/man:/usr/local/share/man
BASEPATH=.:/u/mathomp4/bin:/u/mathomp4/cvstools:/nobackup/gmao_SIteam/Utilities/opengrads/Contents:.:/u/mathomp4/bin:/u/mathomp4/cvstools:/nobackup/gmao_SIteam/Utilities/opengrads/Contents:/opt/sgi/sbin:/opt/sgi/bin:/u/scicon/tools/opt/cmake_3_5_2/bin:/nasa/vim/7.4/bin:/nasa/sles11/git/2.4.5/bin:/nasa/svn/1.6.21/bin:/nasa/htop/1.0.1/bin:/nobackup/gmao_SIteam/Baselibs/GMAO-Baselibs-4_0_7/x86_64-unknown-linux-gnu/pgfortran_16.5-openmpi_1.10.2/Linux/bin:/nasa/pkgsrc/python/2.7.11/bin:/nobackup/gmao_SIteam/MPI/pgi_16.5-openmpi_1.10.2/bin:/nasa/sles11/pgi/16.5/linux86-64/16.5/bin:.:/u/mathomp4/bin:/u/mathomp4/cvstools:/nobackup/gmao_SIteam/Utilities/opengrads/Contents:/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/PBS/bin:/usr/sbin:/sbin:/opt/c3/bin:/opt/sgi/sbin:/opt/sgi/bin:/nasa/xxdiff/3.2-8.1/usr/bin:/nasa/imagemagick/6.4.0-3/bin:/opt/c3/bin
BASE_LD_LIBRARY_PATH=/u/mathomp4/lib
BASH=/bin/sh
BASH_ARGC=([0]="11")
BASH_ARGV=([0]="CXX=g++" [1]="FC=gfortran" [2]="CC=gcc" [3]="CFLAGS=-fPIC " [4]="--disable-netcdf" [5]="--with-zlib=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/zlib,/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/lib" [6]="--with-szlib=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/szlib,/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/lib" [7]="--with-jpeg=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/jpeg,/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/lib" [8]="--includedir=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/hdf" [9]="--program-suffix=-hdf4" [10]="--prefix=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux")
BASH_LINENO=([0]="0")
BASH_SOURCE=([0]="./configure")
BASH_VERSINFO=([0]="3" [1]="2" [2]="57" [3]="1" [4]="release" [5]="x86_64-suse-linux-gnu")
BASH_VERSION='3.2.57(1)-release'
C3_RSH='ssh -oConnectTimeout=10 -oForwardX11=no'
CC=gcc
CFLAGS='-fPIC '
CONFIG_SEDFILE_BODY='s?###CC###?gcc?g
s?###CC_VERSION###?5.3.0?g
s?###CXX###?g++?g
s?###CXX_VERSION###?5.3.0?g
s?###FC###?gfortran?g
s?###FC_VERSION###?(GCC)?g
s?###MPICC###?mpicc?g
s?###MPICC_COMPILER###?gcc?g
s?###MPICC_VERSION###?5.3.0?g
s?###MPICXX###?mpic++?g
s?###MPICXX_COMPILER###?g++?g
s?###MPICXX_VERSION###?5.3.0?g
s?###MPIFC###?mpifort?g
s?###MPIFC_COMPILER###?GNU?g
s?###MPIFC_VERSION###?(GCC)?g
s?###prefix###?/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux?g
s?###includedir###?/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include?g
s?###bindir###?/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/bin?g
s?###VERSIONNUM###?4.0.7?g
s?###CONFIG_SETUP###?gfortran_5.3.0-openmpi_1.10.2?g
s?###ESMF_COMM###?openmpi?g'
CONFIG_SETUP=gfortran_5.3.0-openmpi_1.10.2
CPATH=/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/include:/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/include:/u/scicon/tools/opt/cmake_3_5_2/include:/nasa/imagemagick/6.4.0-3/include
CPLUS_INCLUDE_PATH=/nasa/pkgsrc/2015Q4/gcc5/include/c++
CSHEDIT=emacs
CUDA_NIC_INTEROP=1
CVSROOT=:ext:mathomp4@cvsacldirect:/cvsroot/esma
CVS_RSH=sshq
CXX=g++
CYGPATH_W=echo
DIRSTACK=()
DISPLAY=localhost:50.0
DUALCASE=1
ECHO_C=
ECHO_N=-n
ECHO_T=
EDITOR=/nasa/vim/7.4/bin/vim
ESMABIN=/nobackup/mathomp4/Models/Heracles-UNSTABLE-PGI16/GEOSagcm/Linux/bin
ESMA_NOCVS=
ESMF_COMM=openmpi
ESMF_DIR=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/src/esmf
ES_CC=gcc
ES_CXX=g++
ES_FC=gfortran
EUID=5183
F77=gfortran
F90=gfortran
FC=gfortran
FORT_BUFFERED=1
FPATH=/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/include:/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/include:/u/scicon/tools/opt/cmake_3_5_2/include:/nasa/imagemagick/6.4.0-3/include
GASCRP='/nobackup/mathomp4/Models/Heracles-UNSTABLE-PGI16/GEOSagcm/src/GMAO_Shared/GEOS_Util/plots/grads_util /home/mathomp4/GrADS'
GAUDFT=/nobackup/mathomp4/Models/Heracles-UNSTABLE-PGI16/GEOSagcm/src/GMAO_Shared/GEOS_Util/plots/grads_util/udft_Linux.tools
GCC_COLORS='error=01;31:warning=01;35:note=01;36:caret=01;32:locus=01:quote=01'
GROUP=g26141
GROUPS=()
HOME=/u/mathomp4
HOST=r601i1n9
HOSTNAME=r601i1n9
HOSTTYPE=x86_64-linux
IFS='
'
INCLUDE=/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/include:/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/include:/u/scicon/tools/opt/cmake_3_5_2/include:/nasa/pkgsrc/python/2.7.11/include/python2.7:/nasa/imagemagick/6.4.0-3/include
INFOPATH=/nasa/pkgsrc/2015Q4/gcc5/info
INSTALL='/usr/bin/install -c'
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
LANG=en_US.utf-8
LANGUAGE=C
LC_ALL=C
LDFLAGS=-lm
LD_LIBRARY_PATH=/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64:/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib:/nasa/pkgsrc/2015Q4/gcc5/lib:/nasa/pkgsrc/2015Q4/gcc5/lib64:/u/scicon/tools/opt/cmake_3_5_2/lib:/nasa/imagemagick/6.4.0-3/lib:/nasa/svn/1.6.21/lib64
LD_RUN_PATH=/nasa/pkgsrc/python/2.7.11/lib
LESS=' -fRimWFX '
LESSOPEN='|/u/mathomp4/bin/lesspipe.sh %s'
LESS_TERMCAP_mb='[01;31m'
LESS_TERMCAP_md='[01;38;5;74m'
LESS_TERMCAP_me='[0m'
LESS_TERMCAP_se='[0m'
LESS_TERMCAP_so='[38;5;246m'
LESS_TERMCAP_ue='[0m'
LESS_TERMCAP_us='[04;38;5;146m'
LESS_TERMCAP_zz='[0m'
LIBOBJS=
LIBPATH=/nasa/imagemagick/6.4.0-3/lib
LIBRARY_PATH=/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64:/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib:/u/scicon/tools/opt/cmake_3_5_2/lib:/nasa/svn/1.6.21/lib64
LINENO=3444
LM_LICENSE_FILE=28518@license2
LOADEDMODULES=nas:xxdiff/3.2-8.1:htop/1.0.1:svn/1.6.21:imagemagick/6.4.0-3:python/2.7.11:git/2.4.5:vim/7.4:cmake_3_5_2:gcc5/5.3.0:mpi-openmpi/1.10.2/gcc/5.3.0:math-mkl/2016.2.181
LOGNAME=mathomp4
LS_COLORS='no=00:fi=00:di=01;36:ln=01;34:pi=40;33:so=01;35:bd=40;33;01:cd=40;33;01:or=01;05;37;41:mi=01;05;37;41:ex=01;32:*.cmd=01;32:*.exe=01;32:*.com=01;32:*.btm=01;32:*.bat=01;32:*.sh=01;32:*.csh=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.gz=01;31:*.bz2=01;31:*.pax=01;31:*.rar=01;31:*.bz=01;31:*.tz=01;31:*.rpm=01;31:*.cpio=01;31:*.jpg=01;35:*.gif=01;35:*.bmp=01;35:*.xbm=01;35:*.xpm=01;35:*.png=01;35:*.tif=01;35:'
MACHTYPE=x86_64
MAGICK_HOME=/nasa/imagemagick/6.4.0-3
MAINT='#'
MAINTAINER_MODE_FALSE=
MAINTAINER_MODE_TRUE='#'
MAKEFLAGS=
MAKEINFO=makeinfo
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MANPATH=/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/share/man:/nasa/pkgsrc/2015Q4/gcc5/man:/u/scicon/tools/opt/cmake_3_5_2/share/man:/nasa/sles11/git/2.4.5/share/man:/nasa/pkgsrc/python/2.7.11/man:/nasa/imagemagick/6.4.0-3/share/man:/nasa/svn/1.6.21/share/man:/nasa/htop/1.0.1/share/man:/u/mathomp4/man:/u/mathomp4/share/man:/PBS/man:/nasa/python/2.7.9/man:/nasa/svn/1.6.11/share/man:/opt/c3/man:/opt/sgi/share/man:/usr/share/man:/usr/local/man:/usr/local/share/man:/nasa/xxdiff/3.2-8.1/usr/share/man
MAN_POSIXLY_CORRECT=1
MFLAGS=
MIC_LD_LIBRARY_PATH=/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/mic
MISSING='${SHELL} /nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/src/hdf4/bin/missing'
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MODULEPATH=/usr/share/modules/modulefiles:/nasa/modulefiles-sles11:/nobackup/gmao_SIteam/modulefiles:/u/scicon/tools/modulefiles
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MPICC=mpicc
MPICXX=mpic++
MPIFC=mpifort
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NETCDF_CONFIG=/nobackup/gmao_SIteam/Baselibs/GMAO-Baselibs-4_0_7/x86_64-unknown-linux-gnu/pgfortran_16.5-openmpi_1.10.2/Linux/bin/nc-config
NLSPATH=/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64/locale/%l_%t/%N
NOBACKUP=/nobackup/mathomp4
OMPI_MCA_btl_openib_if_include=mlx4_0:1
OMPI_MCA_oob_tcp_if_include=ib0
OMPI_MCA_shmem_mmap_enable_nfs_warning=0
OMP_NUM_THREADS=1
OPENGADIR=/nobackup/gmao_SIteam/Utilities/opengrads/Contents
OPENMPI=/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2
OPTERR=1
OPTIND=1
OSCAR_HOME=/opt/oscar
OSTYPE=linux
PACKAGE=hdf
[email protected]
PACKAGE_NAME=HDF
PACKAGE_STRING='HDF 4.2.12-pre1'
PACKAGE_TARNAME=hdf
PACKAGE_URL=
PACKAGE_VERSION=4.2.12-pre1
PAGER=/usr/bin/less
PARINIT='rTbgqR B=.,?_A_a Q=_s>|'
PATH=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/bin:/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/bin:/nasa/pkgsrc/2015Q4/gcc5/bin:/u/scicon/tools/opt/cmake_3_5_2/bin:/nasa/vim/7.4/bin:/nasa/sles11/git/2.4.5/bin:/nasa/pkgsrc/python/2.7.11/bin:/nasa/svn/1.6.21/bin:/nasa/htop/1.0.1/bin:.:/u/mathomp4/bin:/u/mathomp4/cvstools:/nobackup/gmao_SIteam/Utilities/opengrads/Contents:.:/u/mathomp4/bin:/u/mathomp4/cvstools:/nobackup/gmao_SIteam/Utilities/opengrads/Contents:/opt/sgi/sbin:/opt/sgi/bin:/nobackup/gmao_SIteam/Baselibs/GMAO-Baselibs-4_0_7/x86_64-unknown-linux-gnu/pgfortran_16.5-openmpi_1.10.2/Linux/bin:.:/u/mathomp4/bin:/u/mathomp4/cvstools:/nobackup/gmao_SIteam/Utilities/opengrads/Contents:/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/PBS/bin:/usr/sbin:/sbin:/opt/c3/bin:/opt/sgi/sbin:/opt/sgi/bin:/opt/c3/bin:/nasa/xxdiff/3.2-8.1/usr/bin:/nasa/imagemagick/6.4.0-3/bin
PATH_SEPARATOR=:
PBS_ENVIRONMENT=PBS_INTERACTIVE
PBS_JOBCOOKIE=000000004083B8B9000000003446EDDF
PBS_JOBDIR=/u/mathomp4
PBS_JOBID=140206.pbspl1.nas.nasa.gov
PBS_JOBNAME=STDIN
PBS_MOMPORT=15003
PBS_NODEFILE=/var/spool/pbs/aux/140206.pbspl1.nas.nasa.gov
PBS_NODENUM=0
PBS_O_HOME=/u/mathomp4
PBS_O_HOST=pfe24.nas.nasa.gov
PBS_O_LANG=en_US.utf-8
PBS_O_LOGNAME=mathomp4
PBS_O_MAIL=/var/mail/mathomp4
PBS_O_PATH=/u/scicon/tools/opt/cmake_3_5_2/bin:/nasa/vim/7.4/bin:/nasa/sles11/git/2.4.5/bin:/nasa/svn/1.6.21/bin:/nasa/htop/1.0.1/bin:/nobackup/gmao_SIteam/Baselibs/GMAO-Baselibs-4_0_7/x86_64-unknown-linux-gnu/pgfortran_16.5-openmpi_1.10.2/Linux/bin:/nasa/pkgsrc/python/2.7.11/bin:/nobackup/gmao_SIteam/MPI/pgi_16.5-openmpi_1.10.2/bin:/nasa/sles11/pgi/16.5/linux86-64/16.5/bin:.:/u/mathomp4/bin:/u/mathomp4/cvstools:/nobackup/gmao_SIteam/Utilities/opengrads/Contents:/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/PBS/bin:/usr/sbin:/sbin:/opt/c3/bin:/opt/sgi/sbin:/opt/sgi/bin:/nasa/xxdiff/3.2-8.1/usr/bin:/nasa/imagemagick/6.4.0-3/bin
PBS_O_QUEUE=route
PBS_O_SHELL=/bin/tcsh
PBS_O_SYSTEM=Linux
PBS_O_TZ=PST8PDT
PBS_O_WORKDIR=/nobackup/mathomp4/Models/Heracles-UNSTABLE-PGI16/GEOSagcm/src/Applications/GEOSgcm_App
PBS_QUEUE=normal
PBS_TASKNUM=1
PIPESTATUS=([0]="0")
PKG_CONFIG_PATH=/nasa/pkgsrc/2015Q4/gcc5/lib/pkgconfig:/nasa/pkgsrc/python/2.7.11/lib/pkgconfig
POSIXLY_CORRECT=y
PPID=71351
PS1='$ '
PS2='> '
PS4='+ '
PWD=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/src/hdf4
PYTHONSTARTUP=/etc/pythonstart
RI='-f ansi'
SET_MAKE=
SHELL=/bin/sh
SHELLOPTS=braceexpand:hashall:interactive-comments:posix
SHLVL=5
SITEAM=/nobackup/gmao_SIteam
SSH_AUTH_SOCK=/tmp/ssh-EpeAx49626/agent.49626
SSH_CLIENT='198.9.4.1 33275 22'
SSH_CONNECTION='198.9.4.1 33275 129.99.230.55 22'
SSH_TTY=/dev/pts/152
TERM=gnome-256color
TMPDIR=/nobackup/mathomp4/scratch
TVDSVRLAUNCHCMD=ssh
TZ=PST8PDT
UID=5183
USER=mathomp4
USE_MAINTAINER_MODE=no
VENDOR=unknown
VERSION=4.2.12-pre1
ZIPOPT='-n .Z:.zip:.zoo:.arc:.lzh:.arj:.gz:.bz2'
_='checking shell variables initial values... '
_LMFILES_=/nasa/modulefiles-sles11/nas:/nasa/modulefiles-sles11/xxdiff/3.2-8.1:/nasa/modulefiles-sles11/htop/1.0.1:/nasa/modulefiles-sles11/svn/1.6.21:/nasa/modulefiles-sles11/imagemagick/6.4.0-3:/nasa/modulefiles-sles11/python/2.7.11:/nasa/modulefiles-sles11/git/2.4.5:/nasa/modulefiles-sles11/vim/7.4:/u/scicon/tools/modulefiles/cmake_3_5_2:/nasa/modulefiles-sles11/gcc5/5.3.0:/nobackup/gmao_SIteam/modulefiles/mpi-openmpi/1.10.2/gcc/5.3.0:/nobackup/gmao_SIteam/modulefiles/math-mkl/2016.2.181
_am_tools='gnutar pax cpio none'
ac_abs_confdir=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/src/hdf4
ac_arg=F77=gfortran
ac_aux_dir=bin
ac_cache_corrupted=false
ac_clean_files=
ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_compiler_gnu=
ac_confdir=.
ac_config_commands=' h4config'
ac_config_guess='/bin/sh bin/config.guess'
ac_config_headers=' hdf/src/h4config.h'
ac_config_libobj_dir=.
ac_config_sub='/bin/sh bin/config.sub'
ac_configure='/bin/sh bin/configure'
ac_configure_args=' '\''--prefix=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux'\'' '\''--program-suffix=-hdf4'\'' '\''--includedir=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/hdf'\'' '\''--with-jpeg=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/jpeg,/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/lib'\'' '\''--with-szlib=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/szlib,/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/lib'\'' '\''--with-zlib=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/zlib,/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/lib'\'' '\''--disable-netcdf'\'' '\''CFLAGS=-fPIC '\'' '\''CC=gcc'\'' '\''FC=gfortran'\'' '\''CXX=g++'\'' '\''LDFLAGS=-lm'\'' '\''F77=gfortran'\'''
ac_cpp='$CPP $CPPFLAGS'
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=set
ac_cv_env_CC_value=gcc
ac_cv_env_CFLAGS_set=set
ac_cv_env_CFLAGS_value='-fPIC '
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=set
ac_cv_env_CXX_value=g++
ac_cv_env_F77_set=set
ac_cv_env_F77_value=gfortran
ac_cv_env_FFLAGS_set=
ac_cv_env_FFLAGS_value=
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value=-lm
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/bin/mkdir
ac_cv_prog_AWK=gawk
ac_cv_prog_make_make_set=yes
ac_dashdash=
ac_default_prefix=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/src/hdf4/hdf4
ac_dir=bin
ac_env_CCC_set=
ac_env_CCC_value=
ac_env_CC_set=set
ac_env_CC_value=gcc
ac_env_CFLAGS_set=set
ac_env_CFLAGS_value='-fPIC '
ac_env_CPPFLAGS_set=
ac_env_CPPFLAGS_value=
ac_env_CPP_set=
ac_env_CPP_value=
ac_env_CXXCPP_set=
ac_env_CXXCPP_value=
ac_env_CXXFLAGS_set=
ac_env_CXXFLAGS_value=
ac_env_CXX_set=set
ac_env_CXX_value=g++
ac_env_F77_set=set
ac_env_F77_value=gfortran
ac_env_FFLAGS_set=
ac_env_FFLAGS_value=
ac_env_LDFLAGS_set=set
ac_env_LDFLAGS_value=-lm
ac_env_LIBS_set=
ac_env_LIBS_value=
ac_env_build_alias_set=
ac_env_build_alias_value=
ac_env_host_alias_set=
ac_env_host_alias_value=
ac_env_target_alias_set=
ac_env_target_alias_value=
ac_envvar=CXX
ac_exec_ext=
ac_ext=c
ac_hostname=r601i1n9
ac_includes_default='#include <stdio.h>
#ifdef HAVE_SYS_TYPES_H
# include <sys/types.h>
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#ifdef HAVE_SYS_STAT_H
# include <sys/stat.h>
#endif
#ifdef STDC_HEADERS
# include <stdlib.h>
# include <stddef.h>
#else
# ifdef HAVE_STDLIB_H
# include <stdlib.h>
# endif
#endif
#ifdef HAVE_STRING_H
# if !defined STDC_HEADERS && defined HAVE_MEMORY_H
# include <memory.h>
# endif
# include <string.h>
#endif
#ifdef HAVE_STRINGS_H
# include <strings.h>
#endif
#ifdef HAVE_INTTYPES_H
# include <inttypes.h>
#endif
#ifdef HAVE_STDINT_H
# include <stdint.h>
#endif
#ifdef HAVE_UNISTD_H
# include <unistd.h>
#endif'
ac_init_help=
ac_init_version=false
ac_install_sh='bin/install-sh -c'
ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
ac_ls_di='144135791185066951 .'
ac_make=make
ac_msg='sources are in ., but `cd .'\'' does not work'
ac_must_keep_next=false
ac_new_set=
ac_new_val=
ac_old_set=
ac_old_val=
ac_optarg=g++
ac_option=CXX=g++
ac_pass=2
ac_precious_vars='build_alias
host_alias
target_alias
CC
CFLAGS
LDFLAGS
LIBS
CPPFLAGS
CPP
CXX
CXXFLAGS
CCC
F77
FFLAGS
CXXCPP'
ac_prev=
ac_prog=gawk
ac_pwd=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/src/hdf4
ac_pwd_ls_di='144135791185066951 .'
ac_script='s/[\\$]/&&/g;s/;s,x,x,$//'
ac_signal=0
ac_site_file=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/etc/config.site
ac_site_file1=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/share/config.site
ac_site_file2=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/etc/config.site
ac_srcdir_defaulted=yes
ac_subst_files=
ac_subst_vars='am__EXEEXT_FALSE
am__EXEEXT_TRUE
LTLIBOBJS
LIBOBJS
DEPRECATED_SYMBOLS
F77_VERSION
CC_VERSION
HDF_BUILD_SHARED_FALSE
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SETX
CONFIG_MODE
CONFIG_USER
CONFIG_DATE
H4_VERSION
HDF_BUILD_XDR_FALSE
HDF_BUILD_XDR_TRUE
BUILD_SHARED_SZIP_CONDITIONAL_FALSE
BUILD_SHARED_SZIP_CONDITIONAL_TRUE
SZIP_INFO
LL_PATH
SZIP_HAS_ENCODER
USE_COMP_SZIP
CXXCPP
OTOOL64
OTOOL
LIPO
NMEDIT
DSYMUTIL
MANIFEST_TOOL
RANLIB
ac_ct_AR
DLLTOOL
OBJDUMP
NM
ac_ct_DUMPBIN
DUMPBIN
LD
FGREP
EGREP
GREP
SED
LIBTOOL
LT_STATIC_EXEC
STATIC_EXEC
UNAME_INFO
enable_static
enable_shared
SHARED_EXTENSION
STATIC_SHARED
TBL
NEQN
DIFF
LEX
YACC
AR
LN_S
BUILD_JAVA_CONDITIONAL_FALSE
BUILD_JAVA_CONDITIONAL_TRUE
JAVA_PATH_NAME
TESTS_JUNIT
JAVA_JUNIT
JUNIT
_ACJNI_JAVAC
JAVADOC
JAR
UUDECODE
JAVAC
JAVA
JAVAFLAGS
JAVACFLAGS
JAVAPREFIX
H4_CLASSPATH
HDF_JAVA
H4_JAVAFLAGS
H4_JAVACFLAGS
JNIFLAGS
BUILD_FORTRAN
HDF_BUILD_FORTRAN_FALSE
HDF_BUILD_FORTRAN_TRUE
FLIBS
ac_ct_F77
FFLAGS
F77
am__fastdepCXX_FALSE
am__fastdepCXX_TRUE
CXXDEPMODE
ac_ct_CXX
CXXFLAGS
CXX
CPP
am__fastdepCC_FALSE
am__fastdepCC_TRUE
CCDEPMODE
am__nodep
AMDEPBACKSLASH
AMDEP_FALSE
AMDEP_TRUE
am__quote
am__include
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OBJEXT
EXEEXT
ac_ct_CC
CPPFLAGS
LDFLAGS
CFLAGS
CC
BUILD_NETCDF
HDF_BUILD_NETCDF_FALSE
HDF_BUILD_NETCDF_TRUE
TEST_FORTRAN_NETCDF
host_os
host_vendor
host_cpu
host
build_os
build_vendor
build_cpu
build
MAINT
MAINTAINER_MODE_FALSE
MAINTAINER_MODE_TRUE
AM_BACKSLASH
AM_DEFAULT_VERBOSITY
AM_DEFAULT_V
AM_V
am__untar
am__tar
AMTAR
am__leading_dot
SET_MAKE
AWK
mkdir_p
MKDIR_P
INSTALL_STRIP_PROGRAM
STRIP
install_sh
MAKEINFO
AUTOHEADER
AUTOMAKE
AUTOCONF
ACLOCAL
VERSION
PACKAGE
CYGPATH_W
am__isrc
INSTALL_DATA
INSTALL_SCRIPT
INSTALL_PROGRAM
target_alias
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build_alias
LIBS
ECHO_T
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mandir
localedir
libdir
psdir
pdfdir
dvidir
htmldir
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docdir
oldincludedir
includedir
localstatedir
sharedstatedir
sysconfdir
datadir
datarootdir
libexecdir
sbindir
bindir
program_transform_name
prefix
exec_prefix
PACKAGE_URL
PACKAGE_BUGREPORT
PACKAGE_STRING
PACKAGE_VERSION
PACKAGE_TARNAME
PACKAGE_NAME
PATH_SEPARATOR
SHELL'
ac_tool_prefix=
ac_unique_file=hdf/src/atom.c
ac_unrecognized_opts=
ac_unrecognized_sep=
ac_user_opts='
enable_option_checking
enable_silent_rules
enable_maintainer_mode
enable_netcdf
enable_dependency_tracking
enable_fortran
enable_java
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with_javac_flags
with_java_flags
enable_shared
enable_static
with_pic
enable_fast_install
with_gnu_ld
with_sysroot
enable_libtool_lock
enable_static_exec
with_fnord
with_zlib
with_jpeg
with_szlib
enable_hdf4_xdr
enable_production
enable_deprecated_symbols
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ac_useropt=netcdf
ac_useropt_orig=netcdf
ac_val='${datarootdir}/man'
ac_var=CXXCPP
ac_word=gawk
am__api_version=1.14
am__leading_dot=.
am__tar='$${TAR-tar} chof - "$$tardir"'
am__untar='$${TAR-tar} xf -'
am_aux_dir=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/src/hdf4/bin
am_cv_make_support_nested_variables=yes
am_lf='
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am_make=make
am_missing_run=
am_sleep_pid=71493
as_basename=basename
as_bourne_compatible='if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then :
emulate sh
NULLCMD=:
# Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
# is contrary to our usage. Disable this feature.
alias -g '\''${1+"$@"}'\''='\''"$@"'\''
setopt NO_GLOB_SUBST
else
case `(set -o) 2>/dev/null` in #(
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set -o posix ;; #(
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as_cr_digits=0123456789
as_cr_letters=abcdefghijklmnopqrstuvwxyz
as_dir=/usr/bin
as_dirname=dirname
as_echo='printf %s\n'
as_echo_n='printf %s'
as_executable_p=as_fn_executable_p
as_expr=expr
as_have_required=yes
as_lineno_1=477
as_lineno_1a=477
as_lineno_2=478
as_lineno_2a=478
as_ln_s='ln -s'
as_me=configure
as_mkdir_p='mkdir -p "$as_dir"'
as_myself=./configure
as_nl='
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as_required='as_fn_return () { (exit $1); }
as_fn_success () { as_fn_return 0; }
as_fn_failure () { as_fn_return 1; }
as_fn_ret_success () { return 0; }
as_fn_ret_failure () { return 1; }
exitcode=0
as_fn_success || { exitcode=1; echo as_fn_success failed.; }
as_fn_failure && { exitcode=1; echo as_fn_failure succeeded.; }
as_fn_ret_success || { exitcode=1; echo as_fn_ret_success failed.; }
as_fn_ret_failure && { exitcode=1; echo as_fn_ret_failure succeeded.; }
if ( set x; as_fn_ret_success y && test x = "$1" ); then :
else
exitcode=1; echo positional parameters were not saved.
fi
test x$exitcode = x0 || exit 1
test -x / || exit 1'
as_save_IFS='
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as_suggested=' as_lineno_1=198 as_lineno_1a=$LINENO
as_lineno_2=199 as_lineno_2a=$LINENO
eval '\''test "x$as_lineno_1'\''$as_run'\''" != "x$as_lineno_2'\''$as_run'\''" &&
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test -n "${ZSH_VERSION+set}${BASH_VERSION+set}" || (
ECHO='\''\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\'\''
ECHO=$ECHO$ECHO$ECHO$ECHO$ECHO
ECHO=$ECHO$ECHO$ECHO$ECHO$ECHO$ECHO
PATH=/empty FPATH=/empty; export PATH FPATH
test "X`printf %s $ECHO`" = "X$ECHO" \
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test $(( 1 + 1 )) = 2 || exit 1'
as_test_x='test -x'
as_tr_cpp='eval sed '\''y%*abcdefghijklmnopqrstuvwxyz%PABCDEFGHIJKLMNOPQRSTUVWXYZ%;s%[^_abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789]%_%g'\'''
as_tr_sh='eval sed '\''y%*+%pp%;s%[^_abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789]%_%g'\'''
as_unset=as_fn_unset
as_var=MAILPATH
bindir='${exec_prefix}/bin'
build=
cache_file=/dev/null
cross_compiling=no
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
enable_netcdf=no
exec_prefix=NONE
host=
htmldir='${docdir}'
includedir=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/hdf
infodir='${datarootdir}/info'
install_sh='${SHELL} /nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/src/hdf4/bin/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='$(MKDIR_P)'
no_create=
no_recursion=
oldincludedir=/usr/include
pdfdir='${docdir}'
prefix=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux
program_prefix=NONE
program_suffix=-hdf4
program_transform_name='s&$$&-hdf4&'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
silent=
site=
srcdir=.
subdirs=
sysconfdir='${prefix}/etc'
target=
verbose=
with_jpeg=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/jpeg,/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/lib
with_szlib=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/szlib,/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/lib
with_zlib=/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/zlib,/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/lib
x_includes=NONE
x_libraries=NONE
configure:3447: result: done
configure:3454: checking build system type
configure:3468: result: x86_64-unknown-linux-gnu
configure:3488: checking host system type
configure:3501: result: x86_64-unknown-linux-gnu
configure:3522: checking if basename works
configure:3528: result: yes
configure:3532: checking if xargs works
configure:3538: result: yes
configure:3581: checking for config x86_64-unknown-linux-gnu
configure:3589: result: no
configure:3581: checking for config x86_64-unknown-linux-gnu
configure:3589: result: no
configure:3581: checking for config unknown-linux-gnu
configure:3589: result: no
configure:3581: checking for config unknown-linux-gnu
configure:3589: result: no
configure:3581: checking for config x86_64-linux-gnu
configure:3589: result: no
configure:3581: checking for config x86_64-linux-gnu
configure:3589: result: no
configure:3581: checking for config x86_64-unknown
configure:3589: result: no
configure:3581: checking for config linux-gnu
configure:3585: result: found
configure:3642: checking whether make sets $(MAKE)
configure:3664: result: yes
configure:3722: checking for gcc
configure:3749: result: gcc
configure:3978: checking for C compiler version
configure:3987: gcc --version >&5
gcc (GCC) 5.3.0
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:3998: $? = 0
configure:3987: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/nasa/pkgsrc/2015Q4/gcc5/libexec/gcc/x86_64-unknown-linux/5.3.0/lto-wrapper
Target: x86_64-unknown-linux
Configured with: ../gcc-5.3.0/configure --disable-libstdcxx-pch --enable-nls --with-libiconv-prefix=/usr --disable-multilib --enable-__cxa_atexit --with-gxx-include-dir=/nasa/pkgsrc/2015Q4/gcc5/include/c++/ --enable-languages='c obj-c++ objc fortran c++' --enable-shared --enable-long-long --with-local-prefix=/nasa/pkgsrc/2015Q4/gcc5 --enable-libssp --enable-threads=posix --with-boot-ldflags='-static-libstdc++ -static-libgcc -Wl,-R/nasa/pkgsrc/2015Q4/lib ' --with-arch=nocona --with-tune=nocona --with-fpmath=sse --prefix=/nasa/pkgsrc/2015Q4/gcc5 --build=x86_64-unknown-linux --host=x86_64-unknown-linux --infodir=/nasa/pkgsrc/2015Q4/gcc5/info --mandir=/nasa/pkgsrc/2015Q4/gcc5/man
Thread model: posix
gcc version 5.3.0 (GCC)
configure:3998: $? = 0
configure:3987: gcc -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:3998: $? = 1
configure:3987: gcc -qversion >&5
gcc: error: unrecognized command line option '-qversion'
gcc: fatal error: no input files
compilation terminated.
configure:3998: $? = 1
configure:4018: checking whether the C compiler works
configure:4040: gcc -fPIC -lm conftest.c >&5
configure:4044: $? = 0
configure:4092: result: yes
configure:4095: checking for C compiler default output file name
configure:4097: result: a.out
configure:4103: checking for suffix of executables
configure:4110: gcc -o conftest -fPIC -lm conftest.c >&5
configure:4114: $? = 0
configure:4136: result:
configure:4158: checking whether we are cross compiling
configure:4166: gcc -o conftest -fPIC -lm conftest.c >&5
configure:4170: $? = 0
configure:4177: ./conftest
configure:4181: $? = 0
configure:4196: result: no
configure:4201: checking for suffix of object files
configure:4223: gcc -c -fPIC conftest.c >&5
configure:4227: $? = 0
configure:4248: result: o
configure:4252: checking whether we are using the GNU C compiler
configure:4271: gcc -c -fPIC conftest.c >&5
configure:4271: $? = 0
configure:4280: result: yes
configure:4289: checking whether gcc accepts -g
configure:4309: gcc -c -g conftest.c >&5
configure:4309: $? = 0
configure:4350: result: yes
configure:4367: checking for gcc option to accept ISO C89
configure:4430: gcc -c -fPIC conftest.c >&5
configure:4430: $? = 0
configure:4443: result: none needed
configure:4468: checking whether gcc understands -c and -o together
configure:4490: gcc -c conftest.c -o conftest2.o
configure:4493: $? = 0
configure:4490: gcc -c conftest.c -o conftest2.o
configure:4493: $? = 0
configure:4505: result: yes
configure:4533: checking for style of include used by make
configure:4561: result: GNU
configure:4587: checking dependency style of gcc
configure:4698: result: gcc3
configure:4718: checking how to run the C preprocessor
configure:4749: gcc -E conftest.c
configure:4749: $? = 0
configure:4763: gcc -E conftest.c
conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:4763: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF"
| #define PACKAGE_TARNAME "hdf"
| #define PACKAGE_VERSION "4.2.12-pre1"
| #define PACKAGE_STRING "HDF 4.2.12-pre1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf"
| #define VERSION "4.2.12-pre1"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:4788: result: gcc -E
configure:4808: gcc -E conftest.c
configure:4808: $? = 0
configure:4822: gcc -E conftest.c
conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:4822: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF"
| #define PACKAGE_TARNAME "hdf"
| #define PACKAGE_VERSION "4.2.12-pre1"
| #define PACKAGE_STRING "HDF 4.2.12-pre1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf"
| #define VERSION "4.2.12-pre1"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:4962: checking for C++ compiler version
configure:4971: g++ --version >&5
g++ (GCC) 5.3.0
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:4982: $? = 0
configure:4971: g++ -v >&5
Using built-in specs.
COLLECT_GCC=g++
COLLECT_LTO_WRAPPER=/nasa/pkgsrc/2015Q4/gcc5/libexec/gcc/x86_64-unknown-linux/5.3.0/lto-wrapper
Target: x86_64-unknown-linux
Configured with: ../gcc-5.3.0/configure --disable-libstdcxx-pch --enable-nls --with-libiconv-prefix=/usr --disable-multilib --enable-__cxa_atexit --with-gxx-include-dir=/nasa/pkgsrc/2015Q4/gcc5/include/c++/ --enable-languages='c obj-c++ objc fortran c++' --enable-shared --enable-long-long --with-local-prefix=/nasa/pkgsrc/2015Q4/gcc5 --enable-libssp --enable-threads=posix --with-boot-ldflags='-static-libstdc++ -static-libgcc -Wl,-R/nasa/pkgsrc/2015Q4/lib ' --with-arch=nocona --with-tune=nocona --with-fpmath=sse --prefix=/nasa/pkgsrc/2015Q4/gcc5 --build=x86_64-unknown-linux --host=x86_64-unknown-linux --infodir=/nasa/pkgsrc/2015Q4/gcc5/info --mandir=/nasa/pkgsrc/2015Q4/gcc5/man
Thread model: posix
gcc version 5.3.0 (GCC)
configure:4982: $? = 0
configure:4971: g++ -V >&5
g++: error: unrecognized command line option '-V'
g++: fatal error: no input files
compilation terminated.
configure:4982: $? = 1
configure:4971: g++ -qversion >&5
g++: error: unrecognized command line option '-qversion'
g++: fatal error: no input files
compilation terminated.
configure:4982: $? = 1
configure:4986: checking whether we are using the GNU C++ compiler
configure:5005: g++ -c conftest.cpp >&5
configure:5005: $? = 0
configure:5014: result: yes
configure:5023: checking whether g++ accepts -g
configure:5043: g++ -c -g conftest.cpp >&5
configure:5043: $? = 0
configure:5084: result: yes
configure:5109: checking dependency style of g++
configure:5220: result: gcc3
configure:5353: checking for Fortran 77 compiler version
configure:5362: gfortran --version >&5
GNU Fortran (GCC) 5.3.0
Copyright (C) 2015 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:5373: $? = 0
configure:5362: gfortran -v >&5
Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/nasa/pkgsrc/2015Q4/gcc5/libexec/gcc/x86_64-unknown-linux/5.3.0/lto-wrapper
Target: x86_64-unknown-linux
Configured with: ../gcc-5.3.0/configure --disable-libstdcxx-pch --enable-nls --with-libiconv-prefix=/usr --disable-multilib --enable-__cxa_atexit --with-gxx-include-dir=/nasa/pkgsrc/2015Q4/gcc5/include/c++/ --enable-languages='c obj-c++ objc fortran c++' --enable-shared --enable-long-long --with-local-prefix=/nasa/pkgsrc/2015Q4/gcc5 --enable-libssp --enable-threads=posix --with-boot-ldflags='-static-libstdc++ -static-libgcc -Wl,-R/nasa/pkgsrc/2015Q4/lib ' --with-arch=nocona --with-tune=nocona --with-fpmath=sse --prefix=/nasa/pkgsrc/2015Q4/gcc5 --build=x86_64-unknown-linux --host=x86_64-unknown-linux --infodir=/nasa/pkgsrc/2015Q4/gcc5/info --mandir=/nasa/pkgsrc/2015Q4/gcc5/man
Thread model: posix
gcc version 5.3.0 (GCC)
configure:5373: $? = 0
configure:5362: gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:5373: $? = 1
configure:5362: gfortran -qversion >&5
gfortran: error: unrecognized command line option '-qversion'
gfortran: fatal error: no input files
compilation terminated.
configure:5373: $? = 1
configure:5382: checking whether we are using the GNU Fortran 77 compiler
configure:5395: gfortran -c conftest.F >&5
configure:5395: $? = 0
configure:5404: result: yes
configure:5410: checking whether gfortran accepts -g
configure:5421: gfortran -c -g conftest.f >&5
configure:5421: $? = 0
configure:5429: result: yes
configure:5463: checking how to get verbose linking output from gfortran
configure:5473: gfortran -c conftest.f >&5
configure:5473: $? = 0
configure:5491: gfortran -o conftest -v -lm conftest.f
Using built-in specs.
Target: x86_64-unknown-linux
Thread model: posix
gcc version 5.3.0 (GCC)
/nasa/pkgsrc/2015Q4/gcc5/libexec/gcc/x86_64-unknown-linux/5.3.0/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=nocona -march=nocona -auxbase conftest -version -fintrinsic-modules-path /nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/finclude -o /nobackup/mathomp4/scratch/ccc0S3xc.s
GNU Fortran (GCC) version 5.3.0 (x86_64-unknown-linux)
compiled by GNU C version 5.3.0, GMP version 6.1.0, MPFR version 3.1.3, MPC version 1.0.3
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
GNU Fortran2008 (GCC) version 5.3.0 (x86_64-unknown-linux)
compiled by GNU C version 5.3.0, GMP version 6.1.0, MPFR version 3.1.3, MPC version 1.0.3
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
as -v --64 -o /nobackup/mathomp4/scratch/ccuhurup.o /nobackup/mathomp4/scratch/ccc0S3xc.s
GNU assembler version 2.25.0 (x86_64-suse-linux) using BFD version (GNU Binutils; SUSE Linux Enterprise 11) 2.25.0
Reading specs from /nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64/libgfortran.spec
rename spec lib to liborig
/nasa/pkgsrc/2015Q4/gcc5/libexec/gcc/x86_64-unknown-linux/5.3.0/collect2 -plugin /nasa/pkgsrc/2015Q4/gcc5/libexec/gcc/x86_64-unknown-linux/5.3.0/liblto_plugin.so -plugin-opt=/nasa/pkgsrc/2015Q4/gcc5/libexec/gcc/x86_64-unknown-linux/5.3.0/lto-wrapper -plugin-opt=-fresolution=/nobackup/mathomp4/scratch/cck5OMtC.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --eh-frame-hdr -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/../lib64/crt1.o /usr/lib/../lib64/crti.o /nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/crtbegin.o -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm /nobackup/mathomp4/scratch/ccuhurup.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/crtend.o /usr/lib/../lib64/crtn.o
configure:5574: result: -v
configure:5576: checking for Fortran 77 libraries of gfortran
configure:5599: gfortran -o conftest -v -lm conftest.f
Using built-in specs.
Target: x86_64-unknown-linux
Thread model: posix
gcc version 5.3.0 (GCC)
/nasa/pkgsrc/2015Q4/gcc5/libexec/gcc/x86_64-unknown-linux/5.3.0/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=nocona -march=nocona -auxbase conftest -version -fintrinsic-modules-path /nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/finclude -o /nobackup/mathomp4/scratch/cct4v6Hi.s
GNU Fortran (GCC) version 5.3.0 (x86_64-unknown-linux)
compiled by GNU C version 5.3.0, GMP version 6.1.0, MPFR version 3.1.3, MPC version 1.0.3
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
GNU Fortran2008 (GCC) version 5.3.0 (x86_64-unknown-linux)
compiled by GNU C version 5.3.0, GMP version 6.1.0, MPFR version 3.1.3, MPC version 1.0.3
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
as -v --64 -o /nobackup/mathomp4/scratch/ccJyXcXv.o /nobackup/mathomp4/scratch/cct4v6Hi.s
GNU assembler version 2.25.0 (x86_64-suse-linux) using BFD version (GNU Binutils; SUSE Linux Enterprise 11) 2.25.0
Reading specs from /nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64/libgfortran.spec
rename spec lib to liborig
/nasa/pkgsrc/2015Q4/gcc5/libexec/gcc/x86_64-unknown-linux/5.3.0/collect2 -plugin /nasa/pkgsrc/2015Q4/gcc5/libexec/gcc/x86_64-unknown-linux/5.3.0/liblto_plugin.so -plugin-opt=/nasa/pkgsrc/2015Q4/gcc5/libexec/gcc/x86_64-unknown-linux/5.3.0/lto-wrapper -plugin-opt=-fresolution=/nobackup/mathomp4/scratch/ccZ8aTeJ.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --eh-frame-hdr -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/../lib64/crt1.o /usr/lib/../lib64/crti.o /nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/crtbegin.o -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm /nobackup/mathomp4/scratch/ccJyXcXv.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/crtend.o /usr/lib/../lib64/crtn.o
configure:5795: result: -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath
configure:5812: checking for dummy main to link with Fortran 77 libraries
configure:5846: gcc -o conftest -fPIC -lm conftest.c -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath >&5
gcc: error: unrecognized command line option '-R'
gcc: error: unrecognized command line option '-R'
configure:5846: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF"
| #define PACKAGE_TARNAME "hdf"
| #define PACKAGE_VERSION "4.2.12-pre1"
| #define PACKAGE_STRING "HDF 4.2.12-pre1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf"
| #define VERSION "4.2.12-pre1"
| /* end confdefs.h. */
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:5875: gcc -o conftest -fPIC -lm conftest.c -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath >&5
gcc: error: unrecognized command line option '-R'
gcc: error: unrecognized command line option '-R'
configure:5875: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF"
| #define PACKAGE_TARNAME "hdf"
| #define PACKAGE_VERSION "4.2.12-pre1"
| #define PACKAGE_STRING "HDF 4.2.12-pre1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf"
| #define VERSION "4.2.12-pre1"
| /* end confdefs.h. */
| #define F77_DUMMY_MAIN MAIN__
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:5875: gcc -o conftest -fPIC -lm conftest.c -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath >&5
gcc: error: unrecognized command line option '-R'
gcc: error: unrecognized command line option '-R'
configure:5875: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF"
| #define PACKAGE_TARNAME "hdf"
| #define PACKAGE_VERSION "4.2.12-pre1"
| #define PACKAGE_STRING "HDF 4.2.12-pre1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf"
| #define VERSION "4.2.12-pre1"
| /* end confdefs.h. */
| #define F77_DUMMY_MAIN MAIN_
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:5875: gcc -o conftest -fPIC -lm conftest.c -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath >&5
gcc: error: unrecognized command line option '-R'
gcc: error: unrecognized command line option '-R'
configure:5875: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF"
| #define PACKAGE_TARNAME "hdf"
| #define PACKAGE_VERSION "4.2.12-pre1"
| #define PACKAGE_STRING "HDF 4.2.12-pre1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf"
| #define VERSION "4.2.12-pre1"
| /* end confdefs.h. */
| #define F77_DUMMY_MAIN __main
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:5875: gcc -o conftest -fPIC -lm conftest.c -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath >&5
gcc: error: unrecognized command line option '-R'
gcc: error: unrecognized command line option '-R'
configure:5875: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF"
| #define PACKAGE_TARNAME "hdf"
| #define PACKAGE_VERSION "4.2.12-pre1"
| #define PACKAGE_STRING "HDF 4.2.12-pre1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf"
| #define VERSION "4.2.12-pre1"
| /* end confdefs.h. */
| #define F77_DUMMY_MAIN MAIN
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:5875: gcc -o conftest -fPIC -lm conftest.c -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath >&5
gcc: error: unrecognized command line option '-R'
gcc: error: unrecognized command line option '-R'
configure:5875: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF"
| #define PACKAGE_TARNAME "hdf"
| #define PACKAGE_VERSION "4.2.12-pre1"
| #define PACKAGE_STRING "HDF 4.2.12-pre1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf"
| #define VERSION "4.2.12-pre1"
| /* end confdefs.h. */
| #define F77_DUMMY_MAIN _MAIN
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:5875: gcc -o conftest -fPIC -lm conftest.c -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath >&5
gcc: error: unrecognized command line option '-R'
gcc: error: unrecognized command line option '-R'
configure:5875: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF"
| #define PACKAGE_TARNAME "hdf"
| #define PACKAGE_VERSION "4.2.12-pre1"
| #define PACKAGE_STRING "HDF 4.2.12-pre1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf"
| #define VERSION "4.2.12-pre1"
| /* end confdefs.h. */
| #define F77_DUMMY_MAIN __MAIN
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:5875: gcc -o conftest -fPIC -lm conftest.c -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath >&5
gcc: error: unrecognized command line option '-R'
gcc: error: unrecognized command line option '-R'
configure:5875: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF"
| #define PACKAGE_TARNAME "hdf"
| #define PACKAGE_VERSION "4.2.12-pre1"
| #define PACKAGE_STRING "HDF 4.2.12-pre1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf"
| #define VERSION "4.2.12-pre1"
| /* end confdefs.h. */
| #define F77_DUMMY_MAIN main_
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:5875: gcc -o conftest -fPIC -lm conftest.c -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath >&5
gcc: error: unrecognized command line option '-R'
gcc: error: unrecognized command line option '-R'
configure:5875: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF"
| #define PACKAGE_TARNAME "hdf"
| #define PACKAGE_VERSION "4.2.12-pre1"
| #define PACKAGE_STRING "HDF 4.2.12-pre1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf"
| #define VERSION "4.2.12-pre1"
| /* end confdefs.h. */
| #define F77_DUMMY_MAIN main__
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:5875: gcc -o conftest -fPIC -lm conftest.c -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath >&5
gcc: error: unrecognized command line option '-R'
gcc: error: unrecognized command line option '-R'
configure:5875: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF"
| #define PACKAGE_TARNAME "hdf"
| #define PACKAGE_VERSION "4.2.12-pre1"
| #define PACKAGE_STRING "HDF 4.2.12-pre1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf"
| #define VERSION "4.2.12-pre1"
| /* end confdefs.h. */
| #define F77_DUMMY_MAIN _main
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:5891: result: unknown
configure:5908: error: in `/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/src/hdf4':
configure:5910: error: linking to Fortran libraries from C fails
See `config.log' for more details
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=x86_64-unknown-linux-gnu
ac_cv_c_compiler_gnu=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=set
ac_cv_env_CC_value=gcc
ac_cv_env_CFLAGS_set=set
ac_cv_env_CFLAGS_value='-fPIC '
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=set
ac_cv_env_CXX_value=g++
ac_cv_env_F77_set=set
ac_cv_env_F77_value=gfortran
ac_cv_env_FFLAGS_set=
ac_cv_env_FFLAGS_value=
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value=-lm
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=yes
ac_cv_f77_dummy_main=unknown
ac_cv_f77_libs=' -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath'
ac_cv_fortran_dummy_main=unknown
ac_cv_host=x86_64-unknown-linux-gnu
ac_cv_objext=o
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/bin/mkdir
ac_cv_prog_AWK=gawk
ac_cv_prog_CPP='gcc -E'
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_cxx_g=yes
ac_cv_prog_f77_g=yes
ac_cv_prog_f77_v=-v
ac_cv_prog_make_make_set=yes
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
am_cv_make_support_nested_variables=yes
am_cv_prog_cc_c_o=yes
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='aclocal-1.14'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='$${TAR-tar}'
AM_BACKSLASH='\'
AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
AM_DEFAULT_VERBOSITY='1'
AM_V='$(V)'
AR=''
AUTOCONF='autoconf'
AUTOHEADER='autoheader'
AUTOMAKE='automake-1.14'
AWK='gawk'
BUILD_FORTRAN='yes'
BUILD_JAVA_CONDITIONAL_FALSE=''
BUILD_JAVA_CONDITIONAL_TRUE=''
BUILD_NETCDF='no'
BUILD_SHARED_SZIP_CONDITIONAL_FALSE=''
BUILD_SHARED_SZIP_CONDITIONAL_TRUE=''
CC='gcc'
CCDEPMODE='depmode=gcc3'
CC_VERSION=''
CFLAGS='-fPIC '
CONFIG_DATE=''
CONFIG_MODE=''
CONFIG_USER=''
CPP='gcc -E'
CPPFLAGS=''
CXX='g++'
CXXCPP=''
CXXDEPMODE='depmode=gcc3'
CXXFLAGS='-g -O2'
CYGPATH_W='echo'
DEFS=''
DEPDIR='.deps'
DEPRECATED_SYMBOLS=''
DIFF=''
DLLTOOL=''
DSYMUTIL=''
DUMPBIN=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP=''
EXEEXT=''
F77='gfortran'
F77_VERSION=''
FFLAGS=''
FGREP=''
FLIBS=' -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0 -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -L/nobackup/gmao_SIteam/MPI/gcc_5.3.0-openmpi_1.10.2/lib -L/nasa/pkgsrc/2015Q4/gcc5/lib/gcc/x86_64-unknown-linux/5.3.0/../../.. -R/nasa/pkgsrc/2015Q4/gcc5//lib/../lib64 -R/nasa/pkgsrc/2015Q4/gcc5/lib/../lib64 -lgfortran -lm -lquadmath'
GREP=''
H4_CLASSPATH=''
H4_JAVACFLAGS=''
H4_JAVAFLAGS=''
H4_VERSION=''
HDF_BUILD_FORTRAN_FALSE=''
HDF_BUILD_FORTRAN_TRUE=''
HDF_BUILD_NETCDF_FALSE=''
HDF_BUILD_NETCDF_TRUE='#'
HDF_BUILD_SHARED_FALSE=''
HDF_BUILD_SHARED_TRUE=''
HDF_BUILD_XDR_FALSE=''
HDF_BUILD_XDR_TRUE=''
HDF_JAVA=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
JAR=''
JAVA=''
JAVAC=''
JAVACFLAGS=''
JAVADOC=''
JAVAFLAGS=''
JAVAPREFIX=''
JAVA_JUNIT=''
JAVA_PATH_NAME=''
JNIFLAGS=''
JUNIT=''
LD=''
LDFLAGS='-lm'
LEX=''
LIBOBJS=''
LIBS=''
LIBTOOL=''
LIPO=''
LL_PATH=''
LN_S=''
LTLIBOBJS=''
LT_STATIC_EXEC=''
MAINT='#'
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAKEINFO='makeinfo'
MANIFEST_TOOL=''
MKDIR_P='/bin/mkdir -p'
NEQN=''
NM=''
NMEDIT=''
OBJDUMP=''
OBJEXT='o'
OTOOL64=''
OTOOL=''
PACKAGE='hdf'
PACKAGE_BUGREPORT='[email protected]'
PACKAGE_NAME='HDF'
PACKAGE_STRING='HDF 4.2.12-pre1'
PACKAGE_TARNAME='hdf'
PACKAGE_URL=''
PACKAGE_VERSION='4.2.12-pre1'
PATH_SEPARATOR=':'
RANLIB=''
SED=''
SETX=''
SET_MAKE=''
SHARED_EXTENSION=''
SHELL='/bin/sh'
STATIC_EXEC=''
STATIC_SHARED=''
STRIP=''
SZIP_HAS_ENCODER=''
SZIP_INFO=''
TBL=''
TESTS_JUNIT=''
TEST_FORTRAN_NETCDF='no'
UNAME_INFO=''
USE_COMP_SZIP=''
UUDECODE=''
VERSION='4.2.12-pre1'
YACC=''
_ACJNI_JAVAC=''
ac_ct_AR=''
ac_ct_CC='gcc'
ac_ct_CXX=''
ac_ct_DUMPBIN=''
ac_ct_F77=''
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE=''
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__nodep='_no'
am__quote=''
am__tar='$${TAR-tar} chof - "$$tardir"'
am__untar='$${TAR-tar} xf -'
bindir='${exec_prefix}/bin'
build='x86_64-unknown-linux-gnu'
build_alias=''
build_cpu='x86_64'
build_os='linux-gnu'
build_vendor='unknown'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
enable_shared=''
enable_static=''
exec_prefix='NONE'
host='x86_64-unknown-linux-gnu'
host_alias=''
host_cpu='x86_64'
host_os='linux-gnu'
host_vendor='unknown'
htmldir='${docdir}'
includedir='/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux/include/hdf'
infodir='${datarootdir}/info'
install_sh='${SHELL} /nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/src/hdf4/bin/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='$(MKDIR_P)'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/nobackup/gmao_SIteam/Baselibs/TmpBaselibs/GMAO-Baselibs-4_0_7-with-HDF4_2_12_pre1/x86_64-unknown-linux-gnu/gfortran_5.3.0-openmpi_1.10.2/Linux'
program_transform_name='s&$$&-hdf4&'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
/* confdefs.h */
#define PACKAGE_NAME "HDF"
#define PACKAGE_TARNAME "hdf"
#define PACKAGE_VERSION "4.2.12-pre1"
#define PACKAGE_STRING "HDF 4.2.12-pre1"
#define PACKAGE_BUGREPORT "[email protected]"
#define PACKAGE_URL ""
#define PACKAGE "hdf"
#define VERSION "4.2.12-pre1"
configure: exit 1
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