I am trying to configure and build HDF5 library with CMake 3.10.1 ctest binary on a Windows 8.1 machine. When I try configuring I get the following output with failure to configure:
loading initial cache file C:/darwin_devel/HDF5_source/CMake-hdf5-1.8.20/CMake-hdf5-1.8.20\hdf5-1.8.20/config/cmake/cacheinit.cmake -- The C compiler identification is MSVC 18.0.40629.0 -- The CXX compiler identification is MSVC 18.0.40629.0 -- Check for working C compiler: C:/Program Files (x86)/Microsoft Visual Studio 12.0/VC/bin/x86_amd64/cl.exe -- Check for working C compiler: C:/Program Files (x86)/Microsoft Visual Studio 12.0/VC/bin/x86_amd64/cl.exe -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: C:/Program Files (x86)/Microsoft Visual Studio 12.0/VC/bin/x86_amd64/cl.exe -- Check for working CXX compiler: C:/Program Files (x86)/Microsoft Visual Studio 12.0/VC/bin/x86_amd64/cl.exe -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- SOVERSION: 10.3.1 -- SOVERSION_TOOLS: 10.0.6 -- SOVERSION_CXX: 15.0.0 -- SOVERSION_F: 10.0.5 -- SOVERSION_HL: 10.2.1 -- SOVERSION_HL_CXX: 11.1.1 -- SOVERSION_HL_F: 10.0.4 -- Check for STD namespace -- Check for STD namespace - found -- Looking for gethostname in ucb; -- Looking for gethostname in ucb; - not found -- Performing Other Test STDC_HEADERS - Success -- Looking for include files windows.h, sys/file.h -- Looking for include files windows.h, sys/file.h - not found -- Looking for include files windows.h, sys/ioctl.h -- Looking for include files windows.h, sys/ioctl.h - not found -- Looking for include files windows.h, sys/resource.h -- Looking for include files windows.h, sys/resource.h - not found -- Looking for include files windows.h, sys/socket.h -- Looking for include files windows.h, sys/socket.h - not found -- Looking for 3 include files windows.h, ..., sys/time.h -- Looking for 3 include files windows.h, ..., sys/time.h - not found -- Looking for 4 include files windows.h, ..., features.h -- Looking for 4 include files windows.h, ..., features.h - not found -- Looking for 4 include files windows.h, ..., dirent.h -- Looking for 4 include files windows.h, ..., dirent.h - not found -- Looking for 4 include files windows.h, ..., setjmp.h -- Looking for 4 include files windows.h, ..., setjmp.h - found -- Looking for 6 include files windows.h, ..., stdint.h -- Looking for 6 include files windows.h, ..., stdint.h - found -- Looking for 7 include files windows.h, ..., unistd.h -- Looking for 7 include files windows.h, ..., unistd.h - not found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for 7 include files windows.h, ..., mach/mach_time.h -- Looking for 7 include files windows.h, ..., mach/mach_time.h - not found -- Looking for 7 include files windows.h, ..., io.h -- Looking for 7 include files windows.h, ..., io.h - found -- Looking for 8 include files windows.h, ..., winsock2.h -- Looking for 8 include files windows.h, ..., winsock2.h - found -- Looking for 9 include files windows.h, ..., sys/timeb.h -- Looking for 9 include files windows.h, ..., sys/timeb.h - found -- Looking for 10 include files windows.h, ..., globus/common.h -- Looking for 10 include files windows.h, ..., globus/common.h - not found -- Looking for 10 include files windows.h, ..., pdb.h -- Looking for 10 include files windows.h, ..., pdb.h - not found -- Looking for 10 include files windows.h, ..., pthread.h -- Looking for 10 include files windows.h, ..., pthread.h - not found -- Looking for 10 include files windows.h, ..., srbclient.h -- Looking for 10 include files windows.h, ..., srbclient.h - not found -- Looking for 10 include files windows.h, ..., string.h -- Looking for 10 include files windows.h, ..., string.h - found -- Looking for 11 include files windows.h, ..., strings.h -- Looking for 11 include files windows.h, ..., strings.h - not found -- Looking for 11 include files windows.h, ..., stdlib.h -- Looking for 11 include files windows.h, ..., stdlib.h - found -- Looking for 12 include files windows.h, ..., memory.h -- Looking for 12 include files windows.h, ..., memory.h - found -- Looking for 13 include files windows.h, ..., dlfcn.h -- Looking for 13 include files windows.h, ..., dlfcn.h - not found -- Looking for 13 include files windows.h, ..., inttypes.h -- Looking for 13 include files windows.h, ..., inttypes.h - found -- Looking for 14 include files windows.h, ..., netinet/in.h -- Looking for 14 include files windows.h, ..., netinet/in.h - not found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of unsigned -- Check size of unsigned - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of __int64 -- Check size of __int64 - done -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Check size of long double -- Check size of long double - done -- Check size of int8_t -- Check size of int8_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of int_least8_t -- Check size of int_least8_t - done -- Check size of uint_least8_t -- Check size of uint_least8_t - done -- Check size of int_fast8_t -- Check size of int_fast8_t - done -- Check size of uint_fast8_t -- Check size of uint_fast8_t - done -- Check size of int16_t -- Check size of int16_t - done -- Check size of uint16_t -- Check size of uint16_t - done -- Check size of int_least16_t -- Check size of int_least16_t - done -- Check size of uint_least16_t -- Check size of uint_least16_t - done -- Check size of int_fast16_t -- Check size of int_fast16_t - done -- Check size of uint_fast16_t -- Check size of uint_fast16_t - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of int_least32_t -- Check size of int_least32_t - done -- Check size of uint_least32_t -- Check size of uint_least32_t - done -- Check size of int_fast32_t -- Check size of int_fast32_t - done -- Check size of uint_fast32_t -- Check size of uint_fast32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Check size of int_least64_t -- Check size of int_least64_t - done -- Check size of uint_least64_t -- Check size of uint_least64_t - done -- Check size of int_fast64_t -- Check size of int_fast64_t - done -- Check size of uint_fast64_t -- Check size of uint_fast64_t - done -- Check size of size_t -- Check size of size_t - done -- Check size of ssize_t -- Check size of ssize_t - failed -- Check size of off_t -- Check size of off_t - done -- Check size of off64_t -- Check size of off64_t - failed -- Looking for 14 include files windows.h, ..., stdbool.h -- Looking for 14 include files windows.h, ..., stdbool.h - found -- Check size of _Bool -- Check size of _Bool - done -- Looking for alarm -- Looking for alarm - not found -- Looking for fcntl -- Looking for fcntl - not found -- Looking for flock -- Looking for flock - not found -- Looking for fork -- Looking for fork - not found -- Looking for frexpf -- Looking for frexpf - not found -- Looking for frexpl -- Looking for frexpl - not found -- Looking for getrusage -- Looking for getrusage - not found -- Looking for llround -- Looking for llround - found -- Looking for llroundf -- Looking for llroundf - found -- Looking for lround -- Looking for lround - found -- Looking for lroundf -- Looking for lroundf - found -- Looking for lstat -- Looking for lstat - not found -- Looking for rand_r -- Looking for rand_r - not found -- Looking for random -- Looking for random - not found -- Looking for round -- Looking for round - found -- Looking for roundf -- Looking for roundf - found -- Looking for setsysinfo -- Looking for setsysinfo - not found -- Looking for signal -- Looking for signal - found -- Looking for setjmp -- Looking for setjmp - found -- Looking for siglongjmp -- Looking for siglongjmp - not found -- Looking for sigsetjmp -- Looking for sigsetjmp - not found -- Looking for sigprocmask -- Looking for sigprocmask - not found -- Looking for snprintf -- Looking for snprintf - not found -- Looking for srandom -- Looking for srandom - not found -- Looking for strtoll -- Looking for strtoll - found -- Looking for strtoull -- Looking for strtoull - found -- Looking for symlink -- Looking for symlink - not found -- Looking for tmpfile -- Looking for tmpfile - found -- Looking for asprintf -- Looking for asprintf - not found -- Looking for vasprintf -- Looking for vasprintf - not found -- Looking for waitpid -- Looking for waitpid - not found -- Looking for vsnprintf -- Looking for vsnprintf - found -- Looking for sigsetjmp -- Looking for sigsetjmp - not found -- Performing CXX Test OLD_HEADER_FILENAME - Failed -- Performing CXX Test H5_NO_NAMESPACE - Failed -- Performing CXX Test H5_NO_STD - Failed -- Performing CXX Test BOOL_NOTDEFINED - Failed -- Performing CXX Test NO_STATIC_CAST - Failed -- Performing CXX Test CXX_HAVE_OFFSETOF - Failed -- Checking for InitOnceExecuteOnce: -- Performing Test InitOnceExecuteOnce - Success -- Performing Other Test HAVE_INLINE - Failed -- Performing Other Test HAVE___INLINE__ - Failed -- Performing Other Test HAVE___INLINE - Success -- Checking for appropriate format for 64 bit long: -- Checking for appropriate format for 64 bit long: found "I64" -- Looking for difftime -- Looking for difftime - found -- Checking IF your system converts long double to (unsigned) long values with special algorithm... no -- Checking IF your system can convert (unsigned) long to long double values with special algorithm... no -- Checking IF correctly converting long double to (unsigned) long long values... yes -- Checking IF correctly converting (unsigned) long long to long double values... yes -- Checking IF alignment restrictions are strictly enforced... yes -- Filter ZLIB is built -- Filter ZLIB is ON -- Filter SZIP is built -- Filter SZIP is ON -- The Fortran compiler identification is Intel 15.0.6.20151119 -- Check for working Fortran compiler: C:/Program Files (x86)/Intel/Composer XE 2015/bin/intel64/ifort.exe -- Check for working Fortran compiler: C:/Program Files (x86)/Intel/Composer XE 2015/bin/intel64/ifort.exe -- works -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Determine Intel Fortran Compiler Implicit Link Path -- Determine Intel Fortran Compiler Implicit Link Path -- done -- Checking whether C:/Program Files (x86)/Intel/Composer XE 2015/bin/intel64/ifort.exe supports Fortran 90 -- Checking whether C:/Program Files (x86)/Intel/Composer XE 2015/bin/intel64/ifort.exe supports Fortran 90 -- yes -- Detecting Fortran/C Interface -- Detecting Fortran/C Interface - Failed to compile CMake Error at config/cmake_ext_mod/HDFUseFortran.cmake:29 (string): string sub-command REGEX, mode MATCH needs at least 5 arguments total to command. Call Stack (most recent call first): CMakeLists.txt:764 (include) CMake Error at config/cmake_ext_mod/HDFUseFortran.cmake:33 (string): string sub-command REGEX, mode MATCH needs at least 5 arguments total to command. Call Stack (most recent call first): CMakeLists.txt:764 (include) -- Testing Fortran sizeof -- Testing Fortran sizeof - OK -- Testing Fortran c_sizeof -- Testing Fortran c_sizeof - OK -- Testing Fortran storage_size -- Testing Fortran storage_size - OK -- Testing Fortran ISO_FORTRAN_ENV -- Testing Fortran ISO_FORTRAN_ENV - OK -- Testing Fortran RealIsNotDouble -- Testing Fortran RealIsNotDouble - OK -- Testing Fortran iso_c_binding -- Testing Fortran iso_c_binding - OK -- Configuring incomplete, errors occurred! See also "C:/darwin_devel/HDF5_source/CMake-hdf5-1.8.20/CMake-hdf5-1.8.20/build/CMakeFiles/CMakeOutput.log". See also "C:/darwin_devel/HDF5_source/CMake-hdf5-1.8.20/CMake-hdf5-1.8.20/build/CMakeFiles/CMakeError.log". I ran the ctest command as described on the website with minor edit to create FORTRAN libraries. My batch command is as follows: "ctest -S HDF5config.cmake,FORTRAN_LIBRARIES=YES,BUILD_GENERATOR=VS201364 -C Release -VV -O hdf5.log" The error (highlighted in red font above) seems to be due to some regex match command not being as expected. What am I doing wrong? Thank you, Vikram -------------------------------------------------- Computational Materials Integrity Materials Engineering Department Southwest Research Institute 210-522-2576
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