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https://issues.apache.org/jira/browse/HDFS-11851?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16171130#comment-16171130
]
Ruslan Dautkhanov commented on HDFS-11851:
------------------------------------------
[~jzhuge], yes I did {{export CLASSPATH=`hadoop classpath`}} before so
{{CLASSPATH}} does have all required jars including {{hadoop-common.jar}}
I think some elements of that hs_err..log file are misleading as it shows
internal events including when the classes were discovered,
for example,
{noformat}
Event: 0.067 Thread 0x0000000000e00000 Exception <a
'java/lang/NoClassDefFoundError': org/apache/hadoop/fs/FileSystem>
(0x0000000580169ab0) thrown at
[/HUDSON3/workspace/8-2-build-linux-amd64/jdk8u141/9370/hotspot/src/share/vm/classfile/systemDictionary.cpp,
line 199]
Event: 0.067 Thread 0x0000000000e00000 Exception <a
'java/lang/NoClassDefFoundError':
org/apache/commons/lang/exception/ExceptionUtils> (0x000000058016c1f0) thrown
at
[/HUDSON3/workspace/8-2-build-linux-amd64/jdk8u141/9370/hotspot/src/share/vm/classfile/systemDictionary.cpp,
line 199]
Event: 0.068 Thread 0x0000000000e00000 Exception <a
'java/lang/NoClassDefFoundError':
org/apache/commons/lang/exception/ExceptionUtils> (0x000000058016e708) thrown
at
[/HUDSON3/workspace/8-2-build-linux-amd64/jdk8u141/9370/hotspot/src/share/vm/classfile/systemDictionary.cpp,
line 199]
{noformat}
but then right down below you see
{noformat}
Event: 0.066 loading class java/io/FileNotFoundException
Event: 0.066 loading class java/io/IOException
Event: 0.066 loading class java/io/IOException done
Event: 0.066 loading class java/io/FileNotFoundException done
Event: 0.066 loading class java/security/PrivilegedActionException
Event: 0.066 loading class java/security/PrivilegedActionException done
Event: 0.067 loading class org/apache/commons/lang/exception/ExceptionUtils
Event: 0.067 loading class org/apache/commons/lang/exception/ExceptionUtils done
Event: 0.067 loading class org/apache/commons/lang/exception/ExceptionUtils
Event: 0.067 loading class org/apache/commons/lang/exception/ExceptionUtils done
{noformat}
Notice {{org/apache/commons/lang/exception/ExceptionUtils}} for example list
twice in that "Internal exceptions (10 events)" section, but then shown as
loaded fine in "Events (10 events)" section. So I think "Internal exceptions"
is misleading?
> getGlobalJNIEnv() may deadlock if exception is thrown
> -----------------------------------------------------
>
> Key: HDFS-11851
> URL: https://issues.apache.org/jira/browse/HDFS-11851
> Project: Hadoop HDFS
> Issue Type: Bug
> Components: libhdfs
> Affects Versions: 3.0.0-alpha4
> Reporter: Henry Robinson
> Assignee: Sailesh Mukil
> Priority: Blocker
> Fix For: 3.0.0-alpha4
>
> Attachments: HDFS-11851.000.patch, HDFS-11851.001.patch,
> HDFS-11851.002.patch, HDFS-11851.003.patch, HDFS-11851.004.patch,
> HDFS-11851.005.patch
>
>
> HDFS-11529 introduced a deadlock into {{getGlobalJNIEnv()}} if an exception
> is thrown. {{getGlobalJNIEnv()}} holds {{jvmMutex}}, but
> {{printExceptionAndFree()}} will eventually try to acquire that lock in
> {{setTLSExceptionStrings()}}.
> The exception might get caught from {{loadFileSystems}}:
> {code}
> jthr = invokeMethod(env, NULL, STATIC, NULL,
> "org/apache/hadoop/fs/FileSystem",
> "loadFileSystems", "()V");
> if (jthr) {
> printExceptionAndFree(env, jthr, PRINT_EXC_ALL,
> "loadFileSystems");
> }
> }
> {code}
> and here's the relevant parts of the stack trace from where I call this API
> in Impala, which uses {{libhdfs}}:
> {code}
> #0 __lll_lock_wait () at
> ../nptl/sysdeps/unix/sysv/linux/x86_64/lowlevellock.S:135
> #1 0x00007ffff4a8d657 in _L_lock_909 () from
> /lib/x86_64-linux-gnu/libpthread.so.0
> #2 0x00007ffff4a8d480 in __GI___pthread_mutex_lock (mutex=0x47ce960
> <jvmMutex>) at ../nptl/pthread_mutex_lock.c:79
> #3 0x0000000002f06056 in mutexLock (m=<optimized out>) at
> /data/2/jenkins/workspace/impala-hadoop-dependency/hadoop/hadoop-hdfs-project/hadoop-hdfs/src/main/native/libhdfs/os/posix/mutexes.c:28
> #4 0x0000000002efe817 in setTLSExceptionStrings (rootCause=0x0,
> stackTrace=0x0) at
> /data/2/jenkins/workspace/impala-hadoop-dependency/hadoop/hadoop-hdfs-project/hadoop-hdfs/src/main/native/libhdfs/jni_helper.c:581
> #5 0x0000000002f065d7 in printExceptionAndFreeV (env=0x513c1e8,
> exc=0x508a8c0, noPrintFlags=<optimized out>, fmt=0x34349cf "loadFileSystems",
> ap=0x7fffffffb660)
> at
> /data/2/jenkins/workspace/impala-hadoop-dependency/hadoop/hadoop-hdfs-project/hadoop-hdfs/src/main/native/libhdfs/exception.c:183
> #6 0x0000000002f0683d in printExceptionAndFree (env=<optimized out>,
> exc=<optimized out>, noPrintFlags=<optimized out>, fmt=<optimized out>)
> at
> /data/2/jenkins/workspace/impala-hadoop-dependency/hadoop/hadoop-hdfs-project/hadoop-hdfs/src/main/native/libhdfs/exception.c:213
> #7 0x0000000002eff60f in getGlobalJNIEnv () at
> /data/2/jenkins/workspace/impala-hadoop-dependency/hadoop/hadoop-hdfs-project/hadoop-hdfs/src/main/native/libhdfs/jni_helper.c:463
> {code}
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