Hi, >> I am installing the rnaseq Pigx pipeline from >> https://github.com/BIMSBbioinfo/pigx/tree/master/pipelines/rnaseq > > Oh, nice!
Thank you to share !! And nice paper ! :-) Do you plan to implement a version with the GWL ? > These variables are defined in Guix since quite some time, so you are > probably using a rather old version of Guix. (The first two are defined > in (gnu packages bioinformatics), the latter two in (gnu packages > haskell).) `guix --version` reports 0.14.0. Weird ? But if the kernel is too old, then somehow the install is not really complete. Right ? > 3.0 is just a tad too old for the C library. What system is this? Is > this SLES from mid 2013? Are you able to upgrade to at least Linux 3.10 > or install the RHEL 6 kernel, which is known to work? Yes, it is an old Suse. My ideas was to be able to fetch up-to-date softwares without modifying the current configuration (lazy sysadmin's work ;-) > I’m afraid there’s no easy way to convince the C library that your > kernel is compatible, because it’s very likely that it isn’t if it > wasn’t heavily patched. If I understand well, the shortest path seems to install a new system from scratch, as GuixSD or Debian. Thank you for all your explanations. You save me some time. All the best, simon
