Taking in account the big difference between 3.6 and master, particularly 
folder and ways to import into the IDE, I've gone and created two different 
folders for each branch with git-new-workdir, but Gradle once again does not 
like symlinks generated :(

For example:

git clone g...@github.com:galderz/hibernate-core.git .repo
git-new-workdir .repo master master
cd master
gradle idea

:buildSrc:compileJava UP-TO-DATE
:buildSrc:compileGroovy UP-TO-DATE
:buildSrc:processResources UP-TO-DATE
:buildSrc:classes UP-TO-DATE
:buildSrc:jar UP-TO-DATE
:buildSrc:assemble UP-TO-DATE
:buildSrc:compileTestJava UP-TO-DATE
:buildSrc:compileTestGroovy UP-TO-DATE
:buildSrc:processTestResources UP-TO-DATE
:buildSrc:testClasses UP-TO-DATE
:buildSrc:test UP-TO-DATE
:buildSrc:check UP-TO-DATE
:buildSrc:build UP-TO-DATE
:hibernate-c3p0:ideaModule
Download 
http://repo1.maven.org/maven2/com/h2database/h2/1.2.145/h2-1.2.145-sources.jar
:hibernate-core:ideaModule
:hibernate-ehcache:ideaModule
Download 
http://repo1.maven.org/maven2/net/sf/ehcache/ehcache-core/2.3.1/ehcache-core-2.3.1.pom
Download 
file:/Users/z/.m2/repository/net/sf/ehcache/ehcache-parent/2.1/ehcache-parent-2.1.pom
Download 
file:/Users/z/.m2/repository/org/slf4j/slf4j-api/1.5.11/slf4j-api-1.5.11.pom
Download 
file:/Users/z/.m2/repository/org/slf4j/slf4j-parent/1.5.11/slf4j-parent-1.5.11.pom
Download 
http://repo1.maven.org/maven2/net/sf/ehcache/ehcache-core/2.3.1/ehcache-core-2.3.1-sources.jar
Download 
http://repo1.maven.org/maven2/org/slf4j/slf4j-api/1.5.11/slf4j-api-1.5.11-sources.jar
Download 
http://repo1.maven.org/maven2/net/sf/ehcache/ehcache-core/2.3.1/ehcache-core-2.3.1.jar
Download 
file:/Users/z/.m2/repository/org/slf4j/slf4j-api/1.5.11/slf4j-api-1.5.11.jar
:hibernate-entitymanager:ideaModule
:hibernate-envers:ideaModule
:hibernate-infinispan:ideaModule
Download 
file:/Users/z/.m2/repository/org/infinispan/infinispan-core/4.2.0.CR4/infinispan-core-4.2.0.CR4-sources.jar
Download 
https://repository.jboss.org/nexus/content/groups/public/i18nlog/i18nlog/1.0.10/i18nlog-1.0.10-sources.jar
Download 
file:/Users/z/.m2/repository/org/jgroups/jgroups/2.11.0.GA/jgroups-2.11.0.GA-sources.jar
:hibernate-oscache:ideaModule
:hibernate-proxool:ideaModule
:hibernate-swarmcache:ideaModule
:release:ideaModule
:ideaModule

FAILURE: Build failed with an exception.

* What went wrong:
Could not list contents of 
'/Users/z/Go/code/hibernate-core.git/master/.git/remotes'.

* Try:
Run with -s or -d option to get more details. Run with -S option to get the 
full (very verbose) stacktrace.

BUILD FAILED

Total time: 1 mins 54.307 secs

Contents of master/.git are: 

total 3264
drwxr-xr-x  15 z  staff      510 Jan 25 10:17 .
drwxr-xr-x  29 z  staff      986 Jan 25 10:22 ..
-rw-r--r--   1 z  staff       23 Jan 25 10:15 HEAD
-rw-r--r--   1 z  staff      313 Jan 25 10:17 MERGE_MSG
lrwxr-xr-x   1 z  staff       53 Jan 25 10:15 config -> 
/Users/z/Go/code/hibernate-core.git/.repo/.git/config
lrwxr-xr-x   1 z  staff       52 Jan 25 10:15 hooks -> 
/Users/z/Go/code/hibernate-core.git/.repo/.git/hooks
-rw-r--r--   1 z  staff  1625377 Jan 25 10:17 index
lrwxr-xr-x   1 z  staff       51 Jan 25 10:15 info -> 
/Users/z/Go/code/hibernate-core.git/.repo/.git/info
drwxr-xr-x   4 z  staff      136 Jan 25 10:15 logs
lrwxr-xr-x   1 z  staff       54 Jan 25 10:15 objects -> 
/Users/z/Go/code/hibernate-core.git/.repo/.git/objects
lrwxr-xr-x   1 z  staff       58 Jan 25 10:15 packed-refs -> 
/Users/z/Go/code/hibernate-core.git/.repo/.git/packed-refs
lrwxr-xr-x   1 z  staff       51 Jan 25 10:15 refs -> 
/Users/z/Go/code/hibernate-core.git/.repo/.git/refs
lrwxr-xr-x   1 z  staff       54 Jan 25 10:15 remotes -> 
/Users/z/Go/code/hibernate-core.git/.repo/.git/remotes
lrwxr-xr-x   1 z  staff       55 Jan 25 10:15 rr-cache -> 
/Users/z/Go/code/hibernate-core.git/.repo/.git/rr-cache
lrwxr-xr-x   1 z  staff       50 Jan 25 10:15 svn -> 
/Users/z/Go/code/hibernate-core.git/.repo/.git/svn

Anyway, regardless of the symlinks stuff, what's Gradle idea looking for stuff 
in .git folder?

--
Galder Zamarreño
Sr. Software Engineer
Infinispan, JBoss Cache


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