Thanks for all the help, getting close. I can now run an HPX application if I switch the allocator to be “system”. However, I get a segfault if I try to use tcmalloc. GDB backtrace:
Program received signal SIGSEGV, Segmentation fault. 0x0000000000000000 in ?? () (gdb) backtrace #0 0x0000000000000000 in ?? () #1 0x00000000009ee0f4 in tcmalloc::Sampler::PopulateFastLog2Table () at src/third_party/gperftools-2.0/src/sampler.cc:68 [...] Are you aware of recent tcmalloc versions breaking HPX? Regards, Justs From: Hartmut Kaiser <[email protected]> Reply-To: "[email protected]" <[email protected]> Date: Friday, December 30, 2016 at 1:49 PM To: "[email protected]" <[email protected]> Cc: Justs Zarins <[email protected]> Subject: RE: [hpx-users] HPX build fail Justs, We have seen this problem before (https://github.com/STEllAR-GROUP/hpx/issues/1529) but we have never been able to reproduce this. Could you help documenting how this happens for us to reproduce, please? For now – you don’t need to install HPX, you should be able to run things right from the build directory. Regards Hartmut --------------- http://boost-spirit.com http://stellar.cct.lsu.edu From: [email protected] [mailto:[email protected]] On Behalf Of Justs Zarins Sent: Friday, December 30, 2016 7:15 AM To: [email protected] Subject: Re: [hpx-users] HPX build fail Hi Thomas, Including the toolchain file did fix the compilation. You are right that the name “cray-intel” threw me off. Now, however, the install process fails with: Install the project... -- Install configuration: "RelWithDebInfo" CMake Error at cmake_install.cmake:48 (file): file INSTALL cannot find "/lus/scratch/jzarins/HPX/lib/hpx/libhpx_parcel_coalescing.so.0.9.99". gmake: *** [install] Error 1 I have libhpx_parcel_coalescing.so and libhpx_parcel_coalescing.so.0 but not libhpx_parcel_coalescing.so.0.9.99. Thanks for the help, Justs From: Hartmut Kaiser <[email protected]<mailto:[email protected]>> Reply-To: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Date: Thursday, December 29, 2016 at 7:05 PM To: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Cc: Justs Zarins <[email protected]<mailto:[email protected]>> Subject: RE: [hpx-users] HPX build fail As a workaround, please try doing: cmake –DHPX_WITH_RUNTIME=OFF … I’m not sure why the static build is trying to link with the shared library here. I’ll investigate. Regards Hartmut --------------- http://boost-spirit.com http://stellar.cct.lsu.edu From: [email protected]<mailto:[email protected]> [mailto:[email protected]] On Behalf Of Justs Zarins Sent: Thursday, December 29, 2016 11:39 AM To: [email protected]<mailto:[email protected]> Subject: Re: [hpx-users] HPX build fail A more verbose final command: Linking CXX executable ../bin/hpx_runtime cd /lus/scratch/jzarins/HPX/runtime && /opt/cmake/3.0.1/bin/cmake -E cmake_link_script CMakeFiles/hpx_runtime_exe.dir/link.txt --verbose=1 /opt/cray/craype/2.5.9/bin/CC -Wall -Wextra -Wno-unused-local-typedefs -Wno-strict-aliasing -Wno-sign-promo -Wno-attributes -Wno-cast-align -Wno-unused-parameter -Wformat=2 -Wno-format-nonliteral -Winit-self -Wdouble-promotion -Wcast-qual -Wcast-align -Werror=trampolines -Werror=parentheses -Werror=reorder -Werror=return-type -Werror=sequence-point -Werror=format -Werror=missing-braces -Werror=sign-compare -fdiagnostics-show-option -Werror=vla -Werror=return-type -Wno-unused-but-set-parameter -Wno-unused-but-set-variable -Werror=uninitialized -Wno-unused-local-typedefs -Wno-sync-nand -Wno-delete-non-virtual-dtor -fvisibility=hidden -O2 -g -DNDEBUG -Wl,-z,defs -fvisibility=hidden CMakeFiles/hpx_runtime_exe.dir/hpx_runtime.cpp.o -o ../bin/hpx_runtime -L/lus/scratch/jzarins/HPX/lib -L/lus/scratch/jzarins/lib/boost/lib -rdynamic ../lib/libhpx_init.a ../lib/libhpx.so.0.9.99 -ldl -lrt /lus/scratch/jzarins/lib/boost/lib/libboost_chrono.so /lus/scratch/jzarins/lib/boost/lib/libboost_date_time.so /lus/scratch/jzarins/lib/boost/lib/libboost_filesystem.so /lus/scratch/jzarins/lib/boost/lib/libboost_program_options.so /lus/scratch/jzarins/lib/boost/lib/libboost_regex.so /lus/scratch/jzarins/lib/boost/lib/libboost_system.so /lus/scratch/jzarins/lib/boost/lib/libboost_thread.so -lpthread /lus/scratch/jzarins/lib/boost/lib/libboost_context.so /lus/scratch/jzarins/lib/boost/lib/libboost_random.so /lus/scratch/jzarins/lib/boost/lib/libboost_atomic.so /lus/scratch/jzarins/lib/tcmalloc/lib/libtcmalloc_minimal.so /lus/scratch/jzarins/lib/hwloc/lib/libhwloc.so -Wl,-rpath,/lus/scratch/jzarins/HPX/lib:/lus/scratch/jzarins/lib/boost/lib:/lus/scratch/jzarins/lib/tcmalloc/lib:/lus/scratch/jzarins/lib/hwloc/lib: /usr/bin/ld: attempted static link of dynamic object `../lib/libhpx.so.0.9.99' collect2: error: ld returned 1 exit status gmake[2]: *** [bin/hpx_runtime] Error 1 gmake[2]: Leaving directory `/lus/scratch/jzarins/HPX' gmake[1]: *** [runtime/CMakeFiles/hpx_runtime_exe.dir/all] Error 2 From: Hartmut Kaiser <[email protected]<mailto:[email protected]>> Reply-To: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Date: Thursday, December 29, 2016 at 3:30 PM To: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Cc: Justs Zarins <[email protected]<mailto:[email protected]>> Subject: RE: [hpx-users] HPX build fail Hey Justs, Could you please give us a bit more information about how you built things? What compiler, what Boost version, what command lines, etc.? Thanks! Regards Hartmut --------------- http://boost-spirit.com http://stellar.cct.lsu.edu From: [email protected]<mailto:[email protected]> [mailto:[email protected]] On Behalf Of Justs Zarins Sent: Thursday, December 29, 2016 9:10 AM To: [email protected]<mailto:[email protected]> Subject: [hpx-users] HPX build fail Hello, I’m trying to build HPX on a Cray XC40 machine. The build is failing when linking: [100%] Built target iostreams_component Linking CXX executable ../bin/hpx_runtime /usr/bin/ld: attempted static link of dynamic object `../lib/libhpx.so.0.9.99' collect2: error: ld returned 1 exit status make[2]: *** [bin/hpx_runtime] Error 1 make[1]: *** [runtime/CMakeFiles/hpx_runtime_exe.dir/all] Error 2 Has cmake generated incorrect Makefiles? I’ve tried to set –DHPX_WITH_STATIC_LINKING=ON but this results in a different linking error: [100%] Building CXX object runtime/CMakeFiles/hpx_runtime_exe.dir/hpx_runtime.cpp.o Linking CXX executable ../bin/hpx_runtime ../lib/libhpx.a(runtime_support_server.cpp.o): In function `hpx::util::plugin::dll::LoadLibrary(hpx::error_code&, bool) [clone .constprop.2162]': runtime_support_server.cpp:(.text+0x147a): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /usr/bin/ld: attempted static link of dynamic object `/lus/scratch/jzarins/lib/tcmalloc/lib/libtcmalloc_minimal.so' collect2: error: ld returned 1 exit status make[2]: *** [bin/hpx_runtime] Error 1 make[1]: *** [runtime/CMakeFiles/hpx_runtime_exe.dir/all] Error 2 make: *** [all] Error 2 Any pointers? Regards, Justs
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