5 manually selected points can be better than 200 automatically.
Masks could be a solution, if there would be a special kind of masks that only 
block selecting exposure optimization points, and do not block areas from 
appearing in the final image.
But even if the points were manually selected, they would not help for high 
level of picture noise, or fast mutating objects such as water.
Ideal solution would be manually selected areas which first would be averaged, 
and then compared.

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https://bugs.launchpad.net/bugs/679957

Title:
  manual nodes selection for exposure optimizer?

Status in Hugin - Panorama Tools GUI:
  Won't Fix

Bug description:
  Maybe there should be an option that control points/areas for exposure 
optimizer are not automatically selected, but manually selectable?
  This should help when there are a lot of moving objects or parallax errors.

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