Julien, 
Looking at your two samples, full.jpg and part.jpg, I see two issues.  One 
is the hot area you identified just below the seam.  The other, which you 
do not discuss, it the lower temperatures of the entire area above the 
seam.  This may be from the temperature or gray scale span that you 
displayed to capture the screen shot, but if not it represents a much more 
pervasive problem than just the hot area below the seam.  

Are the images that overlap at the seam consistent with each other?  That 
is, looking at the same geographic area in adjacent images, do you see the 
same temperatures?  

I did not follow the discussion earlier about using alpha channels, etc., 
but if I am not mistaken (I could be easily mistaken, I am not a Hugin 
expert), Hugin tries to even out the levels of a stitched pano.  I don't 
think you want that.  I don't know if you can completely disable some of 
the functions, like enblend or nona, but I think you can.  Bruno's 
suggestion for enblend -l 1 may address that.  

Can you work exclusively in grayscale?  If you select a temperature range 
that covers all of your images for display, save those as static images, 
either tiff or jpeg or other, and then stitch those, you may end up with 
what you want.  It will not have explicit temperature data, but the gray 
values will map to the temperature.  

JK

On Wednesday, November 21, 2012 4:04:27 PM UTC-5, alouest wrote:
>
> Ok, I will try that.
> I don't really get why I fot those crazy values even with the new enblend.
> The funny things is that if  I create the mosaic with all the pictures 141 
> pictures I get those crazy value.
> When I create it with just 131 pictures i don't get them even though the 
> area is covered.
> I join a screen copy of the same area.
>

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